RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-205	ENST00000577241	ALG12	Q9BV10	488 aa		13.7	□□□□□ -0.22
MSI2-205	ENST00000577241	CBLN4	Q9NTU7	201 aa		13.7	□□□□□ -0.22
MSI2-205	ENST00000577241	TAS2R1	Q9NYW7	299 aa		13.7	□□□□□ -0.22
MSI2-205	ENST00000577241	ATP23	Q9Y6H3	246 aa		13.7	□□□□□ -0.22
MSI2-205	ENST00000577241		V9GYQ6	96 aa		13.7	□□□□□ -0.22
MSI2-205	ENST00000577241	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.7	□□□□□ -0.22
MSI2-205	ENST00000577241	TRAV27	A0A087WT01	109 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	SEC14L2	O76054	403 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	SOD3	P08294	240 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	B4GALT1	P15291	398 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	FUT4	P22083	530 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	APOBEC3A	P31941	199 aa	Predicted RBP	13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	IFNGR2	P38484	337 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	FABP6	P51161	128 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	TUBA1B	P68363	451 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	TUBA4A	P68366	448 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	NAAA	Q02083	359 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	SPOCK1	Q08629	439 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	ETFDH	Q16134	617 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	IQCC	Q4KMZ1	466 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	LCN8	Q6JVE9	175 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	TUBA1A	Q71U36	451 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	WDFY1	Q8IWB7	410 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	MUC15	Q8N387	334 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	SLC22A24	Q8N4F4	322 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	OR4K5	Q8NGD3	323 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	MCHR2	Q969V1	340 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	PERP	Q96FX8	193 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	RBP7	Q96R05	134 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	TMUB1	Q9BVT8	246 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	TMEM38B	Q9NVV0	291 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	B3GNT2	Q9NY97	397 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	FBXO9	Q9UK97	447 aa	Predicted RBP	13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	MOK	Q9UQ07	419 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	AURKC	Q9UQB9	309 aa		13.69	□□□□□ -0.22
MSI2-205	ENST00000577241	PRRC2A	P48634	2157 aa	Known RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	DSCAM	O60469	2012 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	TRBV4-1	A0A0J9YWV2	114 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ATP6V1G2-DDX39B	F2Z307	99 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	AHCYL1	O43865	530 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	KRT36	O76013	467 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	DIRAS1	O95057	198 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	RAB36	O95755	333 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	CECR9	P0C854	216 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	CD79A	P11912	226 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	FOSL1	P15407	271 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	HOXB6	P17509	224 aa	Known RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	RPL4	P36578	427 aa	Known RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	GUCA1A	P43080	201 aa	Predicted RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	GPR4	P46093	362 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	IDH3G	P51553	393 aa	Predicted RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ATP5J2	P56134	94 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	SPIB	Q01892	262 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	CHRNB3	Q05901	458 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	DNAL1	Q4LDG9	190 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241		Q5PR19	223 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	THEM4	Q5T1C6	240 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	C10orf128	Q5T292	105 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	CYP2R1	Q6VVX0	501 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	MDP1	Q86V88	176 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ZDHHC21	Q8IVQ6	265 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ARIH2OS	Q8N7S6	290 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	LRRC75A	Q8NAA5	344 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	SYT14	Q8NB59	555 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	OR13C2	Q8NGS9	318 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ASB9	Q96DX5	294 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	KCNK17	Q96T54	332 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	KCNN2	Q9H2S1	579 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	MAGIX	Q9H6Y5	334 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	BARX1	Q9HBU1	254 aa	Predicted RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	GRHPR	Q9UBQ7	328 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	ZNF346	Q9UL40	294 aa	Known RBP	13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	TMCC3	Q9ULS5	477 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	CAD	P27708	2225 aa		13.68	□□□□□ -0.22
MSI2-205	ENST00000577241	SH3PXD2B	A1X283	911 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	CDC42EP2	O14613	210 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	PDE5A	O76074	875 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	NDUFB2	O95178	105 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	PTH	P01270	115 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	HLA-H	P01893	362 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	CD14	P08571	375 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	NPR2	P20594	1047 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	ACVR1B	P36896	505 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	OMP	P47874	163 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	LIMS1	P48059	325 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	RAB1A	P62820	205 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	RUNX1T1	Q06455	604 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	CD47	Q08722	323 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	NPRL3	Q12980	569 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	TOP3A	Q13472	1001 aa	Predicted RBP	13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	FHL1	Q13642	323 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	SLC36A2	Q495M3	483 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	YTHDF3	Q7Z739	585 aa	Known RBP	13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	LINC00471	Q8N535	108 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	WFDC11	Q8NEX6	87 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	NUP37	Q8NFH4	326 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	OR52J3	Q8NH60	311 aa		13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	HDAC2	Q92769	488 aa	Known RBP	13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	FAM46A	Q96IP4	442 aa	Known RBP	13.67	□□□□□ -0.22
MSI2-205	ENST00000577241	LRGUK	Q96M69	825 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms