RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NANOGP1Q8N7R0 232 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 ZPLD1Q8TCW7 415 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 RNF128Q8TEB7 428 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 SMPDL3BQ92485 455 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 TIMP4Q99727 224 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 RHNO1Q9BSD3 238 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 CCDC90BQ9GZT6 254 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 BCO1Q9HAY6 547 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 RPRD1BQ9NQG5 326 aaKnown RBP11.09□□□□□ -0.63
TSEN54-204ENST00000577197 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 ASB6Q9NWX5 421 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
TSEN54-204ENST00000577197 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
TSEN54-204ENST00000577197 CAB39Q9Y376 341 aaPredicted RBP11.09□□□□□ -0.63
TSEN54-204ENST00000577197 LAMA5O15230 3695 aa11.08□□□□□ -0.63
TSEN54-204ENST00000577197 DNAJC13O75165 2243 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ARPC4-TTLL3A0A0A6YYG9 625 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 DPPA5A6NC42 116 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF726A6NNF4 738 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF814B7Z6K7 855 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 MYL12BO14950 172 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 CXCL13O43927 109 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 TRMUO75648 421 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF432O94892 652 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 LIMS3P0CW19 117 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 LIMS4P0CW20 117 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 PTGS2P35354 604 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 PTGER4P35408 488 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 EIF1AXP47813 144 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 BIDP55957 195 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 WNT4P56705 351 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 RPS7P62081 194 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 GPR50Q13585 617 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 GALEQ14376 348 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 PCK2Q16822 640 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 NRN1LQ496H8 165 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 C10orf128Q5T292 105 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 TMPRSS11AQ6ZMR5 421 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 RHOUQ7L0Q8 258 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 SLC16A9Q7RTY1 509 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 KCTD20Q7Z5Y7 419 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ADGRE4PQ86SQ3 457 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ALDH16A1Q8IZ83 802 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 OR6V1Q8N148 313 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 Q8NA96 180 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 SGCDQ92629 289 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 WDYHV1Q96HA8 205 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 WACQ9BTA9 647 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 RBM38Q9H0Z9 239 aaKnown RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 OR51V1Q9H2C8 321 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 PARPBPQ9NWS1 579 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ERVK13-1Q9NX77 482 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 FOXD3Q9UJU5 478 aaPredicted RBP11.08□□□□□ -0.64
TSEN54-204ENST00000577197 B9D1Q9UPM9 204 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 FLVCR1Q9Y5Y0 555 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 COMMD3-BMI1R4GMX3 469 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF407Q9C0G0 2248 aa11.08□□□□□ -0.64
TSEN54-204ENST00000577197 MED12Q93074 2177 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 SLC35F4A4IF30 521 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 PLGP00747 810 aaPredicted RBP11.07□□□□□ -0.64
TSEN54-204ENST00000577197 HOXD4P09016 255 aaPredicted RBP11.07□□□□□ -0.64
TSEN54-204ENST00000577197 CD53P19397 219 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 RFC3P40938 356 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 STARP49675 285 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 TMBIM6P55061 237 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 TAS2R43P59537 309 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 MLLT11Q13015 90 aaPredicted RBP11.07□□□□□ -0.64
TSEN54-204ENST00000577197 RAB39AQ14964 217 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 SPHARQ15513 63 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 FAM180AQ6UWF9 173 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 CHMP1BQ7LBR1 199 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 SHFQ7M4L6 423 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 GPAT4Q86UL3 456 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 TIGD4Q8IY51 512 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 TMEM123Q8N131 208 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 KLHL36Q8N4N3 616 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 ZIC4Q8N9L1 334 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 ZNF485Q8NCK3 441 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 OR51G2Q8NGK0 314 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 ASB17Q8WXJ9 295 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 OTULINQ96BN8 352 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
TSEN54-204ENST00000577197 OR2M2Q96R28 347 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 NUAK2Q9H093 628 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 MED20Q9H944 212 aa11.07□□□□□ -0.64
TSEN54-204ENST00000577197 MED29Q9NX70 200 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms