RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 MCUR1Q96AQ8 359 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 CLPTM1LQ96KA5 538 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 FUZQ9BT04 418 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 CXorf56Q9H5V9 222 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 ZNF224Q9NZL3 707 aa13.3□□□□□ -0.28
POLR2A-208ENST00000576952 ZNF346Q9UL40 294 aaKnown RBP13.3□□□□□ -0.28
POLR2A-208ENST00000576952 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 NPIPB13A6NJU9 1138 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 NPIPB4C9JG80 1138 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 OVOL3O00110 214 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 GADD45GO95257 159 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 IGHMP01871 453 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 FABP3P05413 133 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 CD79AP11912 226 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 ZNF26P17031 533 aaPredicted RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 PAX7P23759 505 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 OMPP47874 163 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 RPL27P61353 136 aaKnown RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 NAAAQ02083 359 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 ZBED5Q49AG3 693 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 SKA3Q8IX90 412 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 CLDN22Q8N7P3 220 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 FAM169BQ8N8A8 192 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 DHRS9Q9BPW9 319 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 TRAF4Q9BUZ4 470 aaPredicted RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 GSX2Q9BZM3 304 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 C1orf21Q9H246 121 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 IL1RAPQ9NPH3 570 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 ZNF701Q9NV72 531 aaPredicted RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 PRPF19Q9UMS4 504 aaKnown RBP13.29□□□□□ -0.28
POLR2A-208ENST00000576952 TMEM5Q9Y2B1 443 aa13.29□□□□□ -0.28
POLR2A-208ENST00000576952 IGKV1D-43A0A0B4J1Z2 117 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 TCRBV5S2A0A599 114 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 SH3PXD2BA1X283 911 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CENPBD1B2RD01 187 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ARHGEF9O43307 516 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 SLC2A10O95528 541 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CRYAAP02489 173 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 PATE4P0C8F1 98 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CALCRP30988 508 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 RRM2P31350 389 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 TTKP33981 857 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ARR3P36575 388 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ACVR1BP36896 505 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 LIMS1P48059 325 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 FABP6P51161 128 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 FMODQ06828 376 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CD47Q08722 323 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 TRIM25Q14258 630 aaKnown RBP13.28□□□□□ -0.28
POLR2A-208ENST00000576952 GSG1Q2KHT4 349 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 C3orf36Q3SXR2 165 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ANKDD1AQ495B1 522 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 SHEQ5VZ18 495 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 LCN8Q6JVE9 175 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 PIWIL3Q7Z3Z3 882 aaKnown RBP13.28□□□□□ -0.28
POLR2A-208ENST00000576952 HDDC2Q7Z4H3 204 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 DTX2Q86UW9 622 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CCDC36Q8IYA8 594 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 CCDC124Q96CT7 223 aaKnown RBP13.28□□□□□ -0.28
POLR2A-208ENST00000576952 MS4A3Q96HJ5 214 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ZNF75AQ96N20 296 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 KCNK17Q96T54 332 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 SH3GL3Q99963 347 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 KCNS3Q9BQ31 491 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 KATNB1Q9BVA0 655 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 STX18Q9P2W9 335 aaKnown RBP13.28□□□□□ -0.28
POLR2A-208ENST00000576952 ADAM18Q9Y3Q7 739 aa13.28□□□□□ -0.28
POLR2A-208ENST00000576952 TMCC2O75069 709 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 CD99P14209 185 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 PAX1P15863 534 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 RPL4P36578 427 aaKnown RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 GIPRP48546 466 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 PTDSS1P48651 473 aaKnown RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 ZNF84P51523 738 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 ZNF133P52736 654 aaPredicted RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 ATP5J2P56134 94 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 RAB1AP62820 205 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 ERVK-25P63136 954 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 TAF11Q15544 211 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 MTX3Q5HYI7 312 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 AGAP6Q5VW22 663 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 FBXL14Q8N1E6 418 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 MUC15Q8N387 334 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 ZNF519Q8TB69 540 aa13.27□□□□□ -0.29
POLR2A-208ENST00000576952 NANOS1Q8WY41 292 aaKnown RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 NMD3Q96D46 503 aaKnown RBP13.27□□□□□ -0.29
POLR2A-208ENST00000576952 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms