RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 THEM4Q5T1C6 240 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 KDM4DQ6B0I6 523 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 SP5Q6BEB4 398 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 MEX3BQ6ZN04 569 aaKnown RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 JAZF1Q86VZ6 243 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 LNX2Q8N448 690 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 MCHR2Q969V1 340 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 C9orf16Q9BUW7 83 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 PLEKHB1Q9UF11 243 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-217ENST00000575711 ENOPH1Q9UHY7 261 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 TENM4Q6N022 2769 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 DOPEY1Q5JWR5 2465 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 FLNCQ14315 2725 aa12.3□□□□□ -0.44
RPAIN-217ENST00000575711 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 H7C1C5 153 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 EI24O14681 340 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 DHHO43323 396 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 RENP00797 406 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 HIST1H1CP16403 213 aaKnown RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 HOXC12P31275 282 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 KIR2DL3P43628 341 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF84P51523 738 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 LCN6P62502 163 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 ESRRGP62508 458 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 MYBPC1Q00872 1141 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 DAG1Q14118 895 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 GABRA6Q16445 453 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 PGGHGQ32M88 737 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 SLC35F1Q5T1Q4 408 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 DMRTC2Q8IXT2 367 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 CBR4Q8N4T8 237 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 OR52E2Q8NGJ4 325 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 OR4Q3Q8NH05 313 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 OR4K13Q8NH42 304 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 EME1Q96AY2 570 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF837Q96EG3 531 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 MUS81Q96NY9 551 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 SPOCK3Q9BQ16 436 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 TEX12Q9BXU0 123 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 ORC6Q9Y5N6 252 aa12.29□□□□□ -0.44
RPAIN-217ENST00000575711 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 FASNP49327 2511 aaKnown RBP12.29□□□□□ -0.44
RPAIN-217ENST00000575711 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 MITFO75030 526 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 SLC2A10O95528 541 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 IFNGP01579 166 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 COX6B1P14854 86 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 CDKN2AP42771 156 aaKnown RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ALDH3A2P51648 485 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ZNF133P52736 654 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 CRISP1P54107 249 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ARF1P84077 181 aaKnown RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 FMODQ06828 376 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 GINS1Q14691 196 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 LEG1Q6P5S2 330 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ANKRD16Q6P6B7 361 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 KLHL24Q6TFL4 600 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 PTCHD4Q6ZW05 846 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 P2RY8Q86VZ1 359 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 IQCF1Q8N6M8 205 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 SDR9C7Q8NEX9 313 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 NSMAFQ92636 917 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 NMD3Q96D46 503 aaKnown RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 SNX18Q96RF0 628 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 NMNAT3Q96T66 252 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 FOXB1Q99853 325 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
RPAIN-217ENST00000575711 VSX1Q9NZR4 365 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 TMEFF2Q9UIK5 374 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-217ENST00000575711 OR5H1A6NKK0 313 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 HMGN1P05114 100 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 ALPLP05186 524 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 GRK5P34947 590 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 GIPRP48546 466 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 RAD23AP54725 363 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 UBE2NP61088 152 aaKnown RBP12.27□□□□□ -0.45
RPAIN-217ENST00000575711 CDK5Q00535 292 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 TRIP10Q15642 601 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 DNM1P34Q6PK57 102 aa12.27□□□□□ -0.45
RPAIN-217ENST00000575711 SLC25A47Q6Q0C1 308 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms