RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 OR10D3Q8NH80 312 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ASB17Q8WXJ9 295 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 EXTL1Q92935 676 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR10A2Q9H208 303 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 FKBP7Q9Y680 259 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 DIDO1Q9BTC0 2240 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 FAM240BA0A1B0GVZ2 78 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 BCAS1O75363 584 aaPredicted RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 ZNF432O94892 652 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 TGFBR1P36897 503 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 NBL1P41271 181 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 C3P1Q6ZMU1 363 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ZNF627Q7L945 461 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 NDNFQ8TB73 568 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 C1QTNF6Q9BXI9 259 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 NTN4Q9HB63 628 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 SLC52A3Q9NQ40 469 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 PTPRSQ13332 1948 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 SPTBN1Q01082 2364 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR6C65A6NJZ3 312 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 A8MV72 311 aaPredicted RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 GLCEO94923 617 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ABHD16AO95870 558 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 IFNA6P05013 189 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR2T7P0C7T2 308 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 HTR1FP30939 366 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 RAB25P57735 213 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 GMFBP60983 142 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 SKP2Q13309 424 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 SLC7A5P1Q8MH63 180 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 FAM109AQ8N4B1 249 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR2T27Q8NH04 317 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 TMEM41AQ96HV5 264 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ZNF845Q96IR2 970 aaPredicted RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 WDR76Q9H967 626 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 BABAM2Q9NXR7 383 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 MRPL39Q9NYK5 338 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 PMS2P1A4D2B8 440 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 METTL21EPA6NDL7 271 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 RECKO95980 971 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 IGKV3-11P04433 115 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 HTR2AP28223 471 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 EPHA2P29317 976 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 NHLH1Q02575 133 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TCF15Q12870 199 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ZNF169Q14929 603 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 EMC4Q5J8M3 183 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TMPRSS11FQ6ZWK6 438 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ZNF227Q86WZ6 799 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 SULF2Q8IWU5 870 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 HAVCR2Q8TDQ0 301 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 NPRL2Q8WTW4 380 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TEAD3Q99594 435 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 INPP5EQ9NRR6 644 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ZNF221Q9UK13 617 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TGFBR3LH3BV60 316 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 DVL2O14641 736 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TSPAN2O60636 221 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 MAS1P04201 325 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ERCC1P07992 297 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 C1QL3Q5VWW1 255 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 NCCRP1Q6ZVX7 275 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 BOLLQ8N9W6 283 aaKnown RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 APCDD1LQ8NCL9 501 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 OR5L1Q8NGL2 311 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ADIPOR1Q96A54 375 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ALKBH3Q96Q83 286 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 RHNO1Q9BSD3 238 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 EMC7Q9NPA0 242 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 PCDHB16Q9NRJ7 776 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 VSX1Q9NZR4 365 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 IGKV3D-11A0A0A0MRZ8 115 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 PLSCR5A0PG75 271 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ARRDC5A6NEK1 342 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 METTL15A6NJ78 407 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TO15178 435 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 OIP5O43482 229 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 GADD45AP24522 165 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 GABRA4P48169 554 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 SCN1BQ07699 218 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 MGAT2Q10469 447 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 MEP1BQ16820 701 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 TMEM244Q5VVB8 128 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 OR2A2Q6IF42 318 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 FAHD1Q6P587 224 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 PAQR6Q6TCH4 344 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 FIP1L1Q6UN15 594 aaKnown RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 LRRN1Q6UXK5 716 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 FAM57BQ71RH2 274 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 KCTD20Q7Z5Y7 419 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 SPARTQ8N0X7 666 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
SMG6-213ENST00000573166 FAM83FQ8NEG4 500 aaPredicted RBP9.12□□□□□ -0.95
SMG6-213ENST00000573166 GJC3Q8NFK1 279 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms