RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TPMTP51580 245 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 UBE2MP61081 183 aaKnown RBP9.77□□□□□ -0.84
CCDC40-207ENST00000572253 GLT8D1Q68CQ7 371 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 SPRED2Q7Z698 418 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 BEST3Q8N1M1 668 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF563Q8TA94 476 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF346Q9UL40 294 aaKnown RBP9.77□□□□□ -0.84
CCDC40-207ENST00000572253 ERVK-19Q9WJR5 959 aa9.77□□□□□ -0.84
CCDC40-207ENST00000572253 PTPRSQ13332 1948 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 A0A0A6YYC8 382 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 A0A0D9SG52 128 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 SLC22A23A1A5C7 686 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 MEIS3P1A6NDR6 274 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 RFPL4AA6NLU0 287 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 RFPL4AL1F8VTS6 287 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 H7C1C5 153 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 I3L1I5 382 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 SCDO00767 359 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 CDC123O75794 336 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 TXNDC12O95881 172 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 LCN6P62502 163 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 GPM6BQ13491 265 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 DEFB110Q30KQ9 67 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 STPG1Q5TH74 334 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 SHISA5Q8N114 240 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 HERVK_113Q902F9 699 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 WDR89Q96FK6 387 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 MMP25Q9NPA2 562 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 IGKV1D-42A0A075B6H8 117 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 A0A1B0GTH9 108 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM82A0PJX8 343 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 RAB3DO95716 219 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 APOC3P02656 99 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 ALOX5APP20292 161 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF273Q14593 569 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 ARHGAP40Q5TG30 622 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 OR7E24Q6IFN5 339 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 FAM122BQ7Z309 247 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 TMED4Q7Z7H5 227 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 CCDC36Q8IYA8 594 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 C16orf52Q8NHV5 167 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 PHOSPHO2Q8TCD6 241 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 C4orf45Q96LM5 186 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 SLC25A21Q9BQT8 299 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 ALX4Q9H161 411 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-207ENST00000572253 OR10A5Q9H207 317 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 DTX4Q9Y2E6 619 aa9.77□□□□□ -0.85
CCDC40-207ENST00000572253 ATG2BQ96BY7 2078 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ARPC4-TTLL3A0A0A6YYG9 625 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TRIM77I1YAP6 450 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 SULT1C2O00338 296 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 SLC17A2O00624 439 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TOR1AO14656 332 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CD3DP04234 171 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 FCER2P06734 321 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 FBXO45P0C2W1 286 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 AKT2P31751 481 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 KIR2DL1P43626 348 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM196Q5HYL7 178 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CLVS2Q5SYC1 327 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF627Q7L945 461 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ATG4DQ86TL0 474 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF546Q86UE3 836 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TMEM17Q86X19 198 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 GABRG1Q8N1C3 465 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 EXD3Q8N9H8 876 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 PXT1Q8NFP0 134 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 LIPHQ8WWY8 451 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 PLA2G2FQ9BZM2 168 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ULBP3Q9BZM4 244 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 FBXL2Q9UKC9 423 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 A0A087WV48 116 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 OR5K4A6NMS3 321 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 HRKO00198 91 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TNFP01375 233 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 BIKQ13323 160 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ALG11Q2TAA5 492 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 DCAF12L2Q5VW00 463 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ZNF660Q6AZW8 331 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TFAP2EQ6VUC0 442 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ASB17Q8WXJ9 295 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 FAM131CQ96AQ9 280 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 MOGAT1Q96PD6 335 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 SLC6A15Q9H2J7 730 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 POFUT1Q9H488 388 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 DHDHQ9UQ10 334 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TP53BP1Q12888 1972 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-207ENST00000572253 TEX46H3BTG2 121 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 AKR7A3O95154 331 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CT45A8P0DMV1 189 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 CT45A9P0DMV2 189 aa9.76□□□□□ -0.85
CCDC40-207ENST00000572253 MGMTP16455 207 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms