RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
LITAF-208ENST00000571627 CALCRP30988 508 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 SLC9A3P48764 834 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 NAAAQ02083 359 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 RUNX1T1Q06455 604 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 FGD3Q5JSP0 725 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 SLC7A13Q8TCU3 470 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 ASB9Q96DX5 294 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 DHRS1Q96LJ7 313 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 FOXB1Q99853 325 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 THTPAQ9BU02 230 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 BDH2Q9BUT1 245 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 KATNB1Q9BVA0 655 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 NOX3Q9HBY0 568 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 IL1RAPQ9NPH3 570 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 INIPQ9NRY2 104 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 STX18Q9P2W9 335 aaKnown RBP12.65□□□□□ -0.38
LITAF-208ENST00000571627 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
LITAF-208ENST00000571627 CR1P17927 2039 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 NPIPB13A6NJU9 1138 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 NPIPB4C9JG80 1138 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 IGKV3-15P01624 115 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 CRYAAP02489 173 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 SAGP10523 405 aaPredicted RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 CBR1P16152 277 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 MAKP20794 623 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ATP6V1B2P21281 511 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ACVR1BP36896 505 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 DAP3P51398 398 aaKnown RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 PIGFQ07326 219 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 TRAP1Q12931 704 aaKnown RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 TNK1Q13470 666 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 TAF11Q15544 211 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 IQCCQ4KMZ1 466 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 PODNL1Q6PEZ8 512 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 VHLLQ6RSH7 139 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 PIWIL3Q7Z3Z3 882 aaKnown RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 BIVMQ86UB2 503 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 OAFQ86UD1 273 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ZDHHC21Q8IVQ6 265 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 LRGUKQ96M69 825 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 BTBD10Q9BSF8 475 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 TRIM15Q9C019 465 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 GRIP2Q9C0E4 1043 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 NDEL1Q9GZM8 345 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 MAGIXQ9H6Y5 334 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 MOV10Q9HCE1 1003 aaKnown RBP12.64□□□□□ -0.39
LITAF-208ENST00000571627 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 ZNF224Q9NZL3 707 aa12.64□□□□□ -0.39
LITAF-208ENST00000571627 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 CENPBD1B2RD01 187 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 MCIDASD6RGH6 385 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 ATP5HO75947 161 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 DIRAS1O95057 198 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 GADD45GO95257 159 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 RASSF2P50749 326 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 RIPPLY3P57055 190 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 CLRN1P58418 232 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 MS4A2Q01362 244 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 SPIBQ01892 262 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 BNIP1Q12981 228 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 LAPTM4AQ15012 233 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 C3orf36Q3SXR2 165 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 ALG10Q5BKT4 473 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 TBPL2Q6SJ96 375 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 ZNF627Q7L945 461 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 SYT14Q8NB59 555 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 SLC7A6OSQ96CW6 309 aaPredicted RBP12.63□□□□□ -0.39
LITAF-208ENST00000571627 FBXO17Q96EF6 278 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 MS4A3Q96HJ5 214 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 B3GNT2Q9NY97 397 aa12.63□□□□□ -0.39
LITAF-208ENST00000571627 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 TCRBV5S2A0A599 114 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 SSX4O60224 188 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 ENTPD5O75356 428 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 DNAJC8O75937 253 aaPredicted RBP12.62□□□□□ -0.39
LITAF-208ENST00000571627 KRT36O76013 467 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 IGHG1P01857 330 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 QDPRP09417 244 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
LITAF-208ENST00000571627 HOXB6P17509 224 aaKnown RBP12.62□□□□□ -0.39
LITAF-208ENST00000571627 APOBEC3AP31941 199 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms