RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 OR6A2O95222 327 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 CLIC3O95833 236 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 TXNDC12O95881 172 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 GRK5P34947 590 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
RPAIN-209ENST00000571558 CTXN1P60606 82 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 IL18R1Q13478 541 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 SLC17A1Q14916 467 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 POU4F3Q15319 338 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ZNF691Q5VV52 312 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 MBD3L2Q8NHZ7 208 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-209ENST00000571558 RNF128Q8TEB7 428 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ZHX1-C8orf76Q96EF9 292 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 Q96MF0 132 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ZFP3Q96NJ6 502 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 MUS81Q96NY9 551 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 OXGR1Q96P68 337 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 TSPAN32Q96QS1 320 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 KATNB1Q9BVA0 655 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 CALHM2Q9HA72 323 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 BAIAP2Q9UQB8 552 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 ZNF175Q9Y473 711 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 NOX1Q9Y5S8 564 aa12.15□□□□□ -0.46
RPAIN-209ENST00000571558 A0A1W2PPR1 153 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 SH3D21A4FU49 640 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 EEF1E1-BLOC1S5C9J1V9 151 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 IMPA2O14732 288 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 EEF1E1O43324 174 aaKnown RBP12.14□□□□□ -0.47
RPAIN-209ENST00000571558 RNF13O43567 381 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
RPAIN-209ENST00000571558 IDH3BO43837 385 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 CRLF1O75462 422 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 MYF6P23409 242 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 PCYT1AP49585 367 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 SLC16A1P53985 500 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ERVK-25P63136 954 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 PON3Q15166 354 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 TAF11Q15544 211 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ACKR1Q16570 336 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 EEF1A1P5Q5VTE0 462 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 TMEM225Q6GV28 225 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 FCRLAQ7L513 359 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 WDFY1Q8IWB7 410 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ZIC4Q8N9L1 334 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 FNDC9Q8TBE3 224 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ROBO4Q8WZ75 1007 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-209ENST00000571558 SF3B5Q9BWJ5 86 aaKnown RBP12.14□□□□□ -0.47
RPAIN-209ENST00000571558 NDEL1Q9GZM8 345 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 TXNIPQ9H3M7 391 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 CLCF1Q9UBD9 225 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
RPAIN-209ENST00000571558 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 KDM4EB2RXH2 506 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-209ENST00000571558 M0R129 80 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 SURF4O15260 269 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 AQP8O94778 261 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 SYNGR4O95473 234 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 SLC2A10O95528 541 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 GABRB1P18505 474 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 AHCYP23526 432 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 SDHAP31040 664 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 RPS6KA3P51812 740 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 ISL1P61371 349 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 MYBPC1Q00872 1141 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-209ENST00000571558 PDK3Q15120 406 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 CREB3L2Q70SY1 520 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 GPAT4Q86UL3 456 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 ARIH2OSQ8N7S6 290 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 OR9K2Q8NGE7 335 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 FBLIM1Q8WUP2 373 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 UBE2FQ969M7 185 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 Q96M85 177 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 RBM24Q9BX46 236 aaKnown RBP12.13□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF226Q9NYT6 803 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 ZNF346Q9UL40 294 aaKnown RBP12.13□□□□□ -0.47
RPAIN-209ENST00000571558 MCTS1Q9ULC4 181 aaKnown RBP12.13□□□□□ -0.47
RPAIN-209ENST00000571558 KIAA1549Q9HCM3 1950 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 ARID1AO14497 2285 aa12.13□□□□□ -0.47
RPAIN-209ENST00000571558 TEX13CA0A0J9YWL9 993 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 A0A1W2PRG6 482 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SLC22A20A6NK97 555 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
RPAIN-209ENST00000571558 PRKYO43930 277 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 TGM6O95932 706 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 PLGP00747 810 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-209ENST00000571558 HMGN1P05114 100 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 IFNGR1P15260 489 aa12.12□□□□□ -0.47
RPAIN-209ENST00000571558 HIST1H1CP16403 213 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms