RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 KATNB1Q9BVA0 655 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 TXNIPQ9H3M7 391 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 CXorf56Q9H5V9 222 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 DLL4Q9NR61 685 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 ACTR3BQ9P1U1 418 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 POU2F3Q9UKI9 436 aa11.66□□□□□ -0.54
RPAIN-207ENST00000570883 FAM32AQ9Y421 112 aaKnown RBP11.66□□□□□ -0.54
RPAIN-207ENST00000570883 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TCRBV5S2A0A599 114 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 CENPBD1B2RD01 187 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 DHHO43323 396 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 SLC2A10O95528 541 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 QDPRP09417 244 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TTKP33981 857 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 CDKN1AP38936 164 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 CAPZA2P47755 286 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 OMPP47874 163 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 SLC9A3P48764 834 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 ZNF133P52736 654 aaPredicted RBP11.65□□□□□ -0.54
RPAIN-207ENST00000570883 CLRN1P58418 232 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 MYBPC1Q00872 1141 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 FMODQ06828 376 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 NPRL3Q12980 569 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 SHEQ5VZ18 495 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 OAFQ86UD1 273 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 ARHGAP24Q8N264 748 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 CLDN22Q8N7P3 220 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 OR4K5Q8NGD3 323 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 OR52J3Q8NH60 311 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 FGFBP3Q8TAT2 258 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TMEM38BQ9NVV0 291 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TAS2R1Q9NYW7 299 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 ATP23Q9Y6H3 246 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 NF1P21359 2839 aa11.65□□□□□ -0.54
RPAIN-207ENST00000570883 NIPBLQ6KC79 2804 aaeCLIP11.65□□□□□ -0.54
RPAIN-207ENST00000570883 C2CD3Q4AC94 2353 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 IGHV2OR16-5A0A0B4J2B6 119 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 UBOX5O94941 541 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 FABP3P05413 133 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 CD99P14209 185 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ITGA2P17301 1181 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 PAX7P23759 505 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ARR3P36575 388 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 FXYD6P3P58550 94 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 CTXN1P60606 82 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 MS4A2Q01362 244 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 HGFACQ04756 655 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 PIGFQ07326 219 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ANKDD1AQ495B1 522 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 LCN8Q6JVE9 175 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 YTHDF3Q7Z739 585 aaKnown RBP11.64□□□□□ -0.55
RPAIN-207ENST00000570883 SKA3Q8IX90 412 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 CCDC36Q8IYA8 594 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 SLC22A24Q8N4F4 322 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 GPA33Q99795 319 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 MOV10Q9HCE1 1003 aaKnown RBP11.64□□□□□ -0.55
RPAIN-207ENST00000570883 IL1RAPQ9NPH3 570 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 FAIMQ9NVQ4 179 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF346Q9UL40 294 aaKnown RBP11.64□□□□□ -0.55
RPAIN-207ENST00000570883 PRPF19Q9UMS4 504 aaKnown RBP11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ADAM18Q9Y3Q7 739 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 UGT2A1Q9Y4X1 527 aa11.64□□□□□ -0.55
RPAIN-207ENST00000570883 ARHGEF9O43307 516 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 NDUFS7O75251 213 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 CRYAAP02489 173 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 PATE4P0C8F1 98 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 CD79AP11912 226 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF14P17017 642 aaPredicted RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 GIPRP48546 466 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ATP5J2P56134 94 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 RPL27P61353 136 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ERVK-25P63136 954 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 SPIBQ01892 262 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 TAF11Q15544 211 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 GSG1Q2KHT4 349 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ZBED5Q49AG3 693 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 C10orf128Q5T292 105 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 AGAP6Q5VW22 663 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ZNF544Q6NX49 715 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 THSD4Q6ZMP0 1018 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 RRM2BQ7LG56 351 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 PIWIL3Q7Z3Z3 882 aaKnown RBP11.63□□□□□ -0.55
RPAIN-207ENST00000570883 ZDHHC21Q8IVQ6 265 aa11.63□□□□□ -0.55
RPAIN-207ENST00000570883 CDK20Q8IZL9 346 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms