RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SLC22A31A6NKX4 558 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 HSPB2A8KAH6 182 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 EEF1E1-BLOC1S5C9J1V9 151 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF587BE7ETH6 402 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 E9PLN8 166 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 DLGAP1O14490 977 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 DVL2O14641 736 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PRODHO43272 600 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 EEF1E1O43324 174 aaKnown RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 TLX2O43763 284 aaPredicted RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 AHCYL1O43865 530 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PRKYO43930 277 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 WISP2O76076 250 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC2A10O95528 541 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 TXNDC12O95881 172 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 HLA-DQA2P01906 255 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CRHP06850 196 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 GNAO1P09471 354 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PGA4P0DJD7 388 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PGA3P0DJD8 388 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 MYF6P23409 242 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 HOXC12P31275 282 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 OPRM1P35372 400 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ATP6V1E1P36543 226 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CA7P43166 264 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SELENOPP49908 381 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF84P51523 738 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CDH11P55287 796 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 GLO1Q04760 184 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 MAD2L1BPQ15013 274 aaPredicted RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 HSPB2Q16082 182 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ARMC4Q5T2S8 1044 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 RIPPLY2Q5TAB7 128 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 NXNL2Q5VZ03 156 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACSM5Q6NUN0 579 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 MTFR2Q6P444 385 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PLBD1Q6P4A8 553 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADGRE4PQ86SQ3 457 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CHERPQ8IWX8 916 aaKnown RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ENTHD1Q8IYW4 607 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF786Q8N393 782 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 C9orf106Q8NAJ2 232 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 POMGNT2Q8NAT1 580 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SYT14Q8NB59 555 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CYB561A3Q8NBI2 242 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC37A3Q8NCC5 494 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 GALNT11Q8NCW6 608 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR10H5Q8NGA6 315 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 TRUB1Q8WWH5 349 aaKnown RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 RND1Q92730 232 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SNX18Q96RF0 628 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 VKORC1Q9BQB6 163 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR51V1Q9H2C8 321 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 SCN3BQ9NY72 215 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 COQ3Q9NZJ6 369 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 DNAJC27Q9NZQ0 273 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 PROCRQ9UNN8 238 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 RNF6Q9Y252 685 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF835Q9Y2P0 537 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM215AQ9Y5M1 114 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 ANKRD11Q6UB99 2663 aaPredicted RBP5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 CFAP47Q6ZTR5 3102 aa5.84□□□□□ -1.47
CTDNEP1-204ENST00000570484 TNRC6AQ8NDV7 1962 aaKnown RBP5.84□□□□□ -1.48
CTDNEP1-204ENST00000570484 A0A096LPE4 126 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 A0A1B0GUH1 482 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 A0A1W2PPZ6 126 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 IRGMA1A4Y4 181 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC22A23A1A5C7 686 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FAM183AA6NL82 134 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 B8ZZF3 427 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCL21O00585 134 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC16A7O60669 478 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FAM20BO75063 409 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 KHDRBS3O75525 346 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 TRMUO75648 421 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FARS2O95363 451 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 IGHV3-9P01782 118 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SPI1P17947 270 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 CTSSP25774 331 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 TIMP3P35625 211 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 BLVRAP53004 296 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SNRPGP62308 76 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 TEKQ02763 1124 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FMODQ06828 376 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 MRPL49Q13405 166 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 APOFQ13790 326 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC35D3Q5M8T2 416 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 THEM4Q5T1C6 240 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 KLHL24Q6TFL4 600 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 USP51Q70EK9 711 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 FJX1Q86VR8 437 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 DOLPP1Q86YN1 238 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 CPOQ8IVL8 374 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM123Q8N131 208 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 CNIH3Q8TBE1 160 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 NSMAFQ92636 917 aa5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 HDAC2Q92769 488 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-204ENST00000570484 LRRC46Q96FV0 321 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms