RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 POC1B-GALNT4F8VUJ3 575 aa15.08■□□□□ 0
CLK3-227ENST00000570296 G3V2L1 256 aa15.08■□□□□ 0
CLK3-227ENST00000570296 M0R082 166 aa15.08■□□□□ 0
CLK3-227ENST00000570296 TSPAN9O75954 239 aa15.08■□□□□ 0
CLK3-227ENST00000570296 MPIG6BO95866 241 aa15.08■□□□□ 0
CLK3-227ENST00000570296 PTHP01270 115 aa15.08■□□□□ 0
CLK3-227ENST00000570296 WNT2P09544 360 aa15.08■□□□□ 0
CLK3-227ENST00000570296 UQCRC2P22695 453 aa15.08■□□□□ 0
CLK3-227ENST00000570296 ARRB2P32121 409 aa15.08■□□□□ 0
CLK3-227ENST00000570296 CRHR1P34998 444 aa15.08■□□□□ 0
CLK3-227ENST00000570296 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0
CLK3-227ENST00000570296 EGR3Q06889 387 aa15.08■□□□□ 0
CLK3-227ENST00000570296 TTMPQ5BVD1 217 aa15.08■□□□□ 0
CLK3-227ENST00000570296 ZMAT1Q5H9K5 638 aa15.08■□□□□ 0
CLK3-227ENST00000570296 ZYG11AQ6WRX3 759 aa15.08■□□□□ 0
CLK3-227ENST00000570296 UEVLDQ8IX04 471 aa15.08■□□□□ 0
CLK3-227ENST00000570296 HOMEZQ8IX15 550 aa15.08■□□□□ 0
CLK3-227ENST00000570296 RIMKLAQ8IXN7 391 aa15.08■□□□□ 0
CLK3-227ENST00000570296 KRTCAP2Q8N6L1 136 aa15.08■□□□□ 0
CLK3-227ENST00000570296 OR1J1Q8NGS3 322 aa15.08■□□□□ 0
CLK3-227ENST00000570296 ZNF417Q8TAU3 575 aa15.08■□□□□ 0
CLK3-227ENST00000570296 TRNT1Q96Q11 434 aaKnown RBP15.08■□□□□ 0
CLK3-227ENST00000570296 ZNF587Q96SQ5 575 aaPredicted RBP15.08■□□□□ 0
CLK3-227ENST00000570296 SLC38A1Q9H2H9 487 aa15.08■□□□□ 0
CLK3-227ENST00000570296 TRIM33Q9UPN9 1127 aa15.08■□□□□ 0
CLK3-227ENST00000570296 TENM2Q9NT68 2774 aa15.08■□□□□ 0
CLK3-227ENST00000570296 CEACAM18A8MTB9 384 aa15.07■□□□□ 0
CLK3-227ENST00000570296 DBIP07108 87 aaKnown RBP15.07■□□□□ 0
CLK3-227ENST00000570296 GKN3PP0CG01 181 aa15.07■□□□□ 0
CLK3-227ENST00000570296 DNAJB13P59910 316 aa15.07■□□□□ 0
CLK3-227ENST00000570296 C2orf54Q08AI8 447 aa15.07■□□□□ 0
CLK3-227ENST00000570296 ZNF718Q3SXZ3 478 aa15.07■□□□□ 0
CLK3-227ENST00000570296 SPRNQ5BIV9 151 aa15.07■□□□□ 0
CLK3-227ENST00000570296 COX20Q5RI15 118 aa15.07■□□□□ 0
CLK3-227ENST00000570296 H1FNTQ75WM6 255 aaPredicted RBP15.07■□□□□ 0
CLK3-227ENST00000570296 DPPA2Q7Z7J5 298 aa15.07■□□□□ 0
CLK3-227ENST00000570296 CLECL1Q8IZS7 167 aa15.07■□□□□ 0
CLK3-227ENST00000570296 SLC22A24Q8N4F4 322 aa15.07■□□□□ 0
CLK3-227ENST00000570296 ADPRHL1Q8NDY3 354 aa15.07■□□□□ 0
CLK3-227ENST00000570296 OR6N1Q8NGY5 312 aa15.07■□□□□ 0
CLK3-227ENST00000570296 IPCEF1Q8WWN9 437 aaPredicted RBP15.07■□□□□ 0
CLK3-227ENST00000570296 EMC6Q9BV81 110 aa15.07■□□□□ 0
CLK3-227ENST00000570296 MTHFD2LQ9H903 347 aaPredicted RBP15.07■□□□□ 0
CLK3-227ENST00000570296 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.07■□□□□ 0
CLK3-227ENST00000570296 DNAJC15Q9Y5T4 150 aa15.07■□□□□ 0
CLK3-227ENST00000570296 ZNF816-ZNF321PA0A0X1KG74 233 aa15.06■□□□□ 0
CLK3-227ENST00000570296 CDHR4A6H8M9 788 aa15.06■□□□□ 0
CLK3-227ENST00000570296 OR2T1O43869 369 aa15.06■□□□□ 0
CLK3-227ENST00000570296 IGHV4-59P01825 116 aa15.06■□□□□ 0
CLK3-227ENST00000570296 IER3P46695 156 aa15.06■□□□□ 0
CLK3-227ENST00000570296 FGF12P61328 243 aa15.06■□□□□ 0
CLK3-227ENST00000570296 GNB2P62879 340 aa15.06■□□□□ 0
CLK3-227ENST00000570296 EGR4Q05215 589 aa15.06■□□□□ 0
CLK3-227ENST00000570296 HNRNPA0Q13151 305 aaKnown RBP15.06■□□□□ 0
CLK3-227ENST00000570296 ATG16L1Q676U5 607 aa15.06■□□□□ 0
CLK3-227ENST00000570296 TMEM53Q6P2H8 277 aa15.06■□□□□ 0
CLK3-227ENST00000570296 LDLRAD3Q86YD5 345 aa15.06■□□□□ 0
CLK3-227ENST00000570296 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
CLK3-227ENST00000570296 PLEKHA8Q96JA3 519 aa15.06■□□□□ 0
CLK3-227ENST00000570296 PPP3R2Q96LZ3 170 aa15.06■□□□□ 0
CLK3-227ENST00000570296 SIGLEC11Q96RL6 698 aa15.06■□□□□ 0
CLK3-227ENST00000570296 OCSTAMPQ9BR26 566 aa15.06■□□□□ 0
CLK3-227ENST00000570296 SLC19A3Q9BZV2 496 aa15.06■□□□□ 0
CLK3-227ENST00000570296 ZDHHC18Q9NUE0 388 aa15.06■□□□□ 0
CLK3-227ENST00000570296 RLIMQ9NVW2 624 aa15.06■□□□□ 0
CLK3-227ENST00000570296 KIF17Q9P2E2 1029 aa15.06■□□□□ 0
CLK3-227ENST00000570296 FIS1Q9Y3D6 152 aa15.06■□□□□ 0
CLK3-227ENST00000570296 RNASET2O00584 256 aaKnown RBP15.05■□□□□ -0
CLK3-227ENST00000570296 MPV17P39210 176 aa15.05■□□□□ -0
CLK3-227ENST00000570296 TNFAIP6P98066 277 aaPredicted RBP15.05■□□□□ -0
CLK3-227ENST00000570296 DBPQ10586 325 aaPredicted RBP15.05■□□□□ -0
CLK3-227ENST00000570296 DOC2BQ14184 412 aa15.05■□□□□ -0
CLK3-227ENST00000570296 TMEM255AQ5JRV8 349 aa15.05■□□□□ -0
CLK3-227ENST00000570296 FAM69AQ5T7M9 428 aa15.05■□□□□ -0
CLK3-227ENST00000570296 MBNL2Q5VZF2 373 aaKnown RBP15.05■□□□□ -0
CLK3-227ENST00000570296 KANK2Q63ZY3 851 aa15.05■□□□□ -0
CLK3-227ENST00000570296 DHRS7BQ6IAN0 325 aaPredicted RBP15.05■□□□□ -0
CLK3-227ENST00000570296 LRRC74BQ6ZQY2 392 aa15.05■□□□□ -0
CLK3-227ENST00000570296 ZCCHC23Q6ZST2 131 aa15.05■□□□□ -0
CLK3-227ENST00000570296 GALNT4Q8N4A0 578 aa15.05■□□□□ -0
CLK3-227ENST00000570296 ANKFN1Q8N957 763 aa15.05■□□□□ -0
CLK3-227ENST00000570296 OR4A15Q8NGL6 344 aa15.05■□□□□ -0
CLK3-227ENST00000570296 LRTOMTQ8WZ04 291 aa15.05■□□□□ -0
CLK3-227ENST00000570296 MARS2Q96GW9 593 aaKnown RBP15.05■□□□□ -0
CLK3-227ENST00000570296 ARHGDIGQ99819 225 aa15.05■□□□□ -0
CLK3-227ENST00000570296 NUDT16L1Q9BRJ7 211 aaKnown RBP15.05■□□□□ -0
CLK3-227ENST00000570296 K7EIL1 84 aa15.04■□□□□ -0
CLK3-227ENST00000570296 HMGN4O00479 90 aa15.04■□□□□ -0
CLK3-227ENST00000570296 NPHS1O60500 1241 aa15.04■□□□□ -0
CLK3-227ENST00000570296 PPP1R3DO95685 299 aa15.04■□□□□ -0
CLK3-227ENST00000570296 SFTPBP07988 381 aa15.04■□□□□ -0
CLK3-227ENST00000570296 RPS2P15880 293 aaKnown RBP15.04■□□□□ -0
CLK3-227ENST00000570296 NCF2P19878 526 aaPredicted RBP15.04■□□□□ -0
CLK3-227ENST00000570296 GRPRP30550 384 aa15.04■□□□□ -0
CLK3-227ENST00000570296 SYPL1Q16563 259 aa15.04■□□□□ -0
CLK3-227ENST00000570296 PGS1Q32NB8 556 aa15.04■□□□□ -0
CLK3-227ENST00000570296 FOXB2Q5VYV0 432 aa15.04■□□□□ -0
CLK3-227ENST00000570296 C5orf46Q6UWT4 87 aa15.04■□□□□ -0
CLK3-227ENST00000570296 NET1Q7Z628 596 aaPredicted RBP15.04■□□□□ -0
CLK3-227ENST00000570296 KLBQ86Z14 1044 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms