RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MESTQ5EB52 335 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TMPRSS12Q86WS5 348 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 C9orf40Q8IXQ3 194 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CMIPQ8IY22 773 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SYS1Q8N2H4 156 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 OR5AK2Q8NH90 309 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 C1orf216Q8TAB5 229 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 DEDD2Q8WXF8 326 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 RGP1Q92546 391 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MS4A3Q96HJ5 214 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CITED4Q96RK1 184 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 AMELYQ99218 206 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MRM2Q9UI43 246 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 RCE1Q9Y256 329 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF281Q9Y2X9 895 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 NPFFR2Q9Y5X5 522 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 PCDH15Q96QU1 1955 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 RP1P56715 2156 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 A0A1W2PR77 199 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ARPC3O15145 178 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SSNA1O43805 119 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 OR6A2O95222 327 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 UCHL1P09936 223 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 EDN3P14138 238 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CXCL3P19876 107 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 BCKDHBP21953 392 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 FBLP22087 321 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SDHAP31040 664 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 BTCP35070 178 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TAGLN2P37802 199 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 GDNFP39905 211 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 RPS15P62841 145 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CFHR1Q03591 330 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TDGQ13569 410 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 RPUSD3Q6P087 351 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF574Q6ZN55 896 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 GRPEL2Q8TAA5 225 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 GPR119Q8TDV5 335 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SLC46A1Q96NT5 459 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 UBL7Q96S82 380 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 GFI1Q99684 422 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 NUDT22Q9BRQ3 303 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 KCNK15Q9H427 330 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 GPR27Q9NS67 375 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 FRRS1LQ9P0K9 344 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MYEF2Q9P2K5 600 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 KCNG2Q9UJ96 466 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MEIS3P1A6NDR6 274 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TRABD2BA6NFA1 517 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 H0YIG0 161 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 XKRYO14609 159 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 KHDRBS3O75525 346 aaKnown RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 UBL3O95164 117 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 ACAA1P09110 424 aaPredicted RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TMIGD3P0DMS9 266 aaPredicted RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SRFP11831 508 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 MAPK3P27361 379 aaPredicted RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 PLA2G7Q13093 441 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 PLA1AQ53H76 456 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 BICRALQ6AI39 1079 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 GPR139Q6DWJ6 353 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TDHQ8IZJ6 230 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SYNPRQ8TBG9 265 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF721Q8TF20 911 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 CREB3L1Q96BA8 519 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 ZC3HAV1LQ96H79 300 aaKnown RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 DDOQ99489 341 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 CHIAQ9BZP6 476 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SEMA4CQ9C0C4 833 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 OR10A4Q9H209 315 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 CDCP1Q9H5V8 836 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 COPS7AQ9UBW8 275 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 HIF3AQ9Y2N7 669 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 V9GY05 133 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 MPDZO75970 2070 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 COL6A3P12111 3177 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 CPED1A4D0V7 1026 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 LILRA5A6NI73 299 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 IFITM5A6NNB3 132 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SHISA8B8ZZ34 492 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 LMO7DNF2Z398 122 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 MBTPS2O43462 519 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 GMDSO60547 372 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SLC16A7O60669 478 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 DDAH2O95865 285 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 RENP00797 406 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 IGLV3-19P01714 112 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SPARCP09486 303 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TRAPPC2P0DI81 140 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 TRAPPC2BP0DI82 140 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 PTBP1P26599 531 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 GZMKP49863 264 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 RPS4XP62701 263 aaKnown RBP7.93□□□□□ -1.14
LINC00558-201ENST00000569422 HSD11B2P80365 405 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 FAM69BQ5VUD6 431 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 FAM122BQ7Z309 247 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 MDGA2Q7Z553 956 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SLITRK4Q8IW52 837 aa7.93□□□□□ -1.14
LINC00558-201ENST00000569422 SLC35F3Q8IY50 421 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms