RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 M0R3G1 203 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 TRMUO75648 421 aaKnown RBP14.16□□□□□ -0.14
USB1-215ENST00000569252 ZNF432O94892 652 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 CGAP01215 116 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 IGHV3-9P01782 118 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 IGFBP1P08833 259 aaPredicted RBP14.16□□□□□ -0.14
USB1-215ENST00000569252 ASCL1P50553 236 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 NPRL3Q12980 569 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 KRR1Q13601 381 aaKnown RBP14.16□□□□□ -0.14
USB1-215ENST00000569252 P2RY6Q15077 328 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 THEM4Q5T1C6 240 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 SLC35F1Q5T1Q4 408 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ARMC4Q5T2S8 1044 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 TSPO2Q5TGU0 170 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ANKRD34AQ69YU3 496 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 TFAP2EQ6VUC0 442 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 Q6ZT83 130 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ADCK1Q86TW2 530 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 LIX1LQ8IVB5 337 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 C20orf196Q8IYI0 205 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 SYT14Q8NB59 555 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ZNF555Q8NEP9 628 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 Q96M85 177 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ALG12Q9BV10 488 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 ULBP2Q9BZM5 246 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 GLTPQ9NZD2 209 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 PRSS50Q9UI38 385 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 FOXD3Q9UJU5 478 aaPredicted RBP14.16□□□□□ -0.14
USB1-215ENST00000569252 NCOA6Q14686 2063 aaPredicted RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 CIB4A0PJX0 185 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 MITFO75030 526 aaPredicted RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 TXNDC12O95881 172 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 ZNF26P17031 533 aaPredicted RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 ZNF3P17036 446 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 PAICSP22234 425 aaKnown RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 NTF4P34130 210 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 GRK5P34947 590 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 ZNF84P51523 738 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 FXYD6P3P58550 94 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 PTGES3Q15185 160 aaKnown RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 ZIK1Q3SY52 487 aaPredicted RBP14.15□□□□□ -0.14
USB1-215ENST00000569252 DNM1P34Q6PK57 102 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 NHLRC1Q6VVB1 395 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 LNX2Q8N448 690 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 OR52E2Q8NGJ4 325 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 RASD2Q96D21 266 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 RDH12Q96NR8 316 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 SLC29A1Q99808 456 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 PLA2G12AQ9BZM1 189 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 SLC7A10Q9NS82 523 aa14.15□□□□□ -0.14
USB1-215ENST00000569252 KIAA1549Q9HCM3 1950 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 PRSS37A4D1T9 235 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 BHLHE40O14503 412 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 UPK3AO75631 287 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 QDPRP09417 244 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 PGA4P0DJD7 388 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 PGA3P0DJD8 388 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 HIST1H1CP16403 213 aaKnown RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 PEX2P28328 305 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 MPGP29372 298 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 CDK5Q00535 292 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 ROR2Q01974 943 aaKnown RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.14□□□□□ -0.15
USB1-215ENST00000569252 SNAPC1Q16533 368 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 PGGHGQ32M88 737 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 LEG1Q6P5S2 330 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 FAM122BQ7Z309 247 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 TMEM123Q8N131 208 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 OR8D4Q8NGM9 314 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 OR4K13Q8NH42 304 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 ZNF519Q8TB69 540 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 TMEM54Q969K7 222 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 OTULINQ96BN8 352 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 USB1Q9BQ65 265 aaKnown RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 RERGLQ9H628 205 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 CRLF2Q9HC73 371 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 SMPD3Q9NY59 655 aaPredicted RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 TVP23BQ9NYZ1 205 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 JKAMPQ9P055 326 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 TMEFF2Q9UIK5 374 aaPredicted RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
USB1-215ENST00000569252 SPG11Q96JI7 2443 aa14.14□□□□□ -0.15
USB1-215ENST00000569252 NKX2-6A6NCS4 301 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 TP53P04637 393 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 IL32P24001 234 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 CRABP1P29762 137 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 HOXC12P31275 282 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 CD79BP40259 229 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 CENPAP49450 140 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 SH3BGRP55822 239 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 CDC42P60953 191 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 TMEM236Q5W0B7 351 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 OR7E24Q6IFN5 339 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 ZNF474Q6S9Z5 364 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 IQCF1Q8N6M8 205 aa14.13□□□□□ -0.15
USB1-215ENST00000569252 RELL2Q8NC24 303 aaPredicted RBP14.13□□□□□ -0.15
USB1-215ENST00000569252 NOXO1Q8NFA2 376 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms