RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 THBDP07204 575 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 COX5AP20674 150 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 MAKP20794 623 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 SLC6A6P31641 620 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 RPS4XP62701 263 aaKnown RBP11.84□□□□□ -0.51
CLK3-218ENST00000566926 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLK3-218ENST00000566926 CDK5Q00535 292 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 EGR4Q05215 589 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 ZBED5Q49AG3 693 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 RBM48Q5RL73 367 aaKnown RBP11.84□□□□□ -0.51
CLK3-218ENST00000566926 C12orf73Q69YU5 71 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 HIST3H2AQ7L7L0 130 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 AAED1Q7RTV5 226 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 SCAIQ8N9R8 606 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 POMGNT2Q8NAT1 580 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 FAM81AQ8TBF8 368 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 HIST1H2ACQ93077 130 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 KTI12Q96EK9 354 aaPredicted RBP11.84□□□□□ -0.51
CLK3-218ENST00000566926 ZNF696Q9H7X3 374 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 TAS2R16Q9NYV7 291 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 MALT1Q9UDY8 824 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 SIGLEC7Q9Y286 467 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 B3GALT5Q9Y2C3 310 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 ARID1AO14497 2285 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 FTCDNL1E5RQL4 147 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 IDH3BO43837 385 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 FZD7O75084 574 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 PTP4A3O75365 173 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 LYZL6O75951 148 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 CLIC3O95833 236 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 TP53P04637 393 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 CCDC159P0C7I6 412 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 ASAH2BP0C7U1 165 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 APEHP13798 732 aaKnown RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 ZNF43P17038 809 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 FUT1P19526 365 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 EPHA2P29317 976 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 FAPQ12884 760 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 GINS1Q14691 196 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 MAD2L1BPQ15013 274 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 TIMM23BQ5SRD1 257 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 C1QTNF12Q5T7M4 302 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 MEDAGQ5VYS4 303 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 P3H2Q8IVL5 708 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 C10orf53Q8N6V4 93 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 ZNF433Q8N7K0 673 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 ADPRHL1Q8NDY3 354 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 NRGNQ92686 78 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 TAAR8Q969N4 342 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 ZNF566Q969W8 418 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 OXGR1Q96P68 337 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 ASPNQ9BXN1 380 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 OR52D1Q9H346 318 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 ESRP2Q9H6T0 727 aaKnown RBP11.83□□□□□ -0.52
CLK3-218ENST00000566926 SCOCQ9UIL1 159 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 HIF3AQ9Y2N7 669 aa11.83□□□□□ -0.52
CLK3-218ENST00000566926 CSMD1Q96PZ7 3565 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
CLK3-218ENST00000566926 KRT33AO76009 404 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 CH25HO95992 272 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 IFNGP01579 166 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 IGHV3-9P01782 118 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 LYNP07948 512 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 RPSAP08865 295 aaKnown RBP11.82□□□□□ -0.52
CLK3-218ENST00000566926 GRK5P34947 590 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 P2RY4P51582 365 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 CD47Q08722 323 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 TSC22D1Q15714 1073 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 TAB1Q15750 504 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 STK11Q15831 433 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 PGGHGQ32M88 737 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 C6orf141Q5SZD1 244 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 DPY19L2P2Q6ZN68 376 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 PTCHD4Q6ZW05 846 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 CREB3L2Q70SY1 520 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 SLC46A3Q7Z3Q1 461 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 NANOGNBQ7Z5D8 188 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 LNX2Q8N448 690 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 OR13C2Q8NGS9 318 aa11.82□□□□□ -0.52
CLK3-218ENST00000566926 MBD6Q96DN6 1003 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms