RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
SPG7-213ENST00000566221 STARD4Q96DR4 205 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 MRPL13Q9BYD1 178 aaKnown RBP13.09□□□□□ -0.31
SPG7-213ENST00000566221 LINC00470Q9BZP3 86 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 B3GAT2Q9NPZ5 323 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 PLSCR4Q9NRQ2 329 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 COQ3Q9NZJ6 369 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 FOXD3Q9UJU5 478 aaPredicted RBP13.09□□□□□ -0.31
SPG7-213ENST00000566221 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
SPG7-213ENST00000566221 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 SLC5A6Q9Y289 635 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 GMPPBQ9Y5P6 360 aa13.09□□□□□ -0.31
SPG7-213ENST00000566221 PRSS37A4D1T9 235 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 MPZL2O60487 215 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 SMNDC1O75940 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPG7-213ENST00000566221 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 RENP00797 406 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 CGAP01215 116 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 BMP5P22003 454 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 CHRNB4P30926 498 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 ADORA2A-AS1P86434 159 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 KRT80Q6KB66 452 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 LEG1Q6P5S2 330 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 ABHD12BQ7Z5M8 362 aaPredicted RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 C8orf59Q8N0T1 100 aaPredicted RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 FAM81AQ8TBF8 368 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 ASB5Q8WWX0 329 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 TMEM54Q969K7 222 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 IMPAD1Q9NX62 359 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 MALT1Q9UDY8 824 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
SPG7-213ENST00000566221 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
SPG7-213ENST00000566221 TEX15Q9BXT5 2789 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 SLC22A23A1A5C7 686 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 H7C1C5 153 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 KRT33AO76009 404 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 EDNRAP25101 427 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 CDKN2AP42771 156 aaKnown RBP13.07□□□□□ -0.32
SPG7-213ENST00000566221 PCYT1AP49585 367 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 LCN6P62502 163 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 CRMP1Q14194 572 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 HIST3H3Q16695 136 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 THEM4Q5T1C6 240 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 TSPO2Q5TGU0 170 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 FBXW9Q5XUX1 488 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 THAP5Q7Z6K1 395 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 MRGPRGQ86SM5 289 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 UBE2J2Q8N2K1 259 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 SYT14Q8NB59 555 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
SPG7-213ENST00000566221 ALKBH3Q96Q83 286 aaPredicted RBP13.07□□□□□ -0.32
SPG7-213ENST00000566221 RBP7Q96R05 134 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 NMNAT3Q96T66 252 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 ULBP2Q9BZM5 246 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 FN3KQ9H479 309 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 SLC7A10Q9NS82 523 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 GLTPQ9NZD2 209 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 UPB1Q9UBR1 384 aa13.07□□□□□ -0.32
SPG7-213ENST00000566221 HCFC1P51610 2035 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 EEF1E1-BLOC1S5C9J1V9 151 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 M0R3G1 203 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 MSTNO14793 375 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 EEF1E1O43324 174 aaKnown RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 UPK3AO75631 287 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 SLC2A10O95528 541 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 CRABP1P29762 137 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 CSNK2BP67870 215 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 TEKQ02763 1124 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 ZNF362Q5T0B9 420 aaPredicted RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 Q6ZT83 130 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 BEND4Q6ZU67 534 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 CYB561A3Q8NBI2 242 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 RELL2Q8NC24 303 aaPredicted RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 OR8J1Q8NGP2 316 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 TMEM163Q8TC26 289 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 NMD3Q96D46 503 aaKnown RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 CNBD2Q96M20 576 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 MUS81Q96NY9 551 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 OPN3Q9H1Y3 402 aaPredicted RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 SYT4Q9H2B2 425 aa13.06□□□□□ -0.32
SPG7-213ENST00000566221 RPRD1BQ9NQG5 326 aaKnown RBP13.06□□□□□ -0.32
SPG7-213ENST00000566221 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms