RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 RPL18Q07020 188 aaKnown RBP17.13■□□□□ 0.33
CLN6-206ENST00000565471 RAB39AQ14964 217 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 FXNQ16595 210 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 HIST3H3Q16695 136 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 MSMPQ1L6U9 139 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 IQCCQ4KMZ1 466 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 FAM166AQ6J272 317 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 ZCCHC24Q8N2G6 241 aaKnown RBP17.13■□□□□ 0.33
CLN6-206ENST00000565471 ZNF786Q8N393 782 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 TMEM255BQ8WV15 326 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 TMEM239Q8WW34 195 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 SGTBQ96EQ0 304 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 SEPHS2Q99611 448 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 BEX2Q9BXY8 128 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 MRPL37Q9BZE1 423 aaKnown RBP17.13■□□□□ 0.33
CLN6-206ENST00000565471 SLC7A8Q9UHI5 535 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 ANK3Q12955 4377 aaKnown RBP17.13■□□□□ 0.33
CLN6-206ENST00000565471 ATRQ13535 2644 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 LOC100653049A0A140TA62 436 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 A0A1W2PRG6 482 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 SH3PXD2BA1X283 911 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 M0R233 179 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 KRT34O76011 436 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 ADRA2AP08913 450 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 QDPRP09417 244 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 FUT1P19526 365 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 PIN1Q13526 163 aaPredicted RBP17.12■□□□□ 0.33
CLN6-206ENST00000565471 CYBRD1Q53TN4 286 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
CLN6-206ENST00000565471 ZNF584Q8IVC4 421 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 PFN4Q8NHR9 129 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 FGFBP3Q8TAT2 258 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 MRPL13Q9BYD1 178 aaKnown RBP17.12■□□□□ 0.33
CLN6-206ENST00000565471 SHARPINQ9H0F6 387 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 STX18Q9P2W9 335 aaKnown RBP17.12■□□□□ 0.33
CLN6-206ENST00000565471 KCNS2Q9ULS6 477 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 CAPN7Q9Y6W3 813 aa17.12■□□□□ 0.33
CLN6-206ENST00000565471 MGRN1O60291 552 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 TSPAN19P0C672 248 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 PATE4P0C8F1 98 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 KDELR2P33947 212 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 OR1E2P47887 323 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 DAP3P51398 398 aaKnown RBP17.11■□□□□ 0.33
CLN6-206ENST00000565471 CLRN1P58418 232 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 NOXO1Q8NFA2 376 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 OR2T12Q8NG77 320 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 UBASH3BQ8TF42 649 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 ASB10Q8WXI3 467 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 MCHR2Q969V1 340 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 MSI2Q96DH6 328 aaKnown RBP17.11■□□□□ 0.33
CLN6-206ENST00000565471 MS4A5Q9H3V2 200 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 CCDC134Q9H6E4 229 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 INIPQ9NRY2 104 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 C20orf141Q9NUB4 165 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 AP3M1Q9Y2T2 418 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 MED31Q9Y3C7 131 aa17.11■□□□□ 0.33
CLN6-206ENST00000565471 LOC100289279A0A1B0GTE1 492 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 HTR3EA5X5Y0 456 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 NPIPB13A6NJU9 1138 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 NPIPB4C9JG80 1138 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 MCIDASD6RGH6 385 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 SHOX2O60902 331 aaPredicted RBP17.1■□□□□ 0.33
CLN6-206ENST00000565471 F13BP05160 661 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 TACSTD2P09758 323 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 IGFBP5P24593 272 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 ZNF84P51523 738 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 ZNF133P52736 654 aaPredicted RBP17.1■□□□□ 0.33
CLN6-206ENST00000565471 RUNX1T1Q06455 604 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLN6-206ENST00000565471 SLC36A2Q495M3 483 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 LRRC23Q53EV4 343 aaPredicted RBP17.1■□□□□ 0.33
CLN6-206ENST00000565471 TMEM53Q6P2H8 277 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 ARPINQ7Z6K5 226 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 MICU2Q8IYU8 434 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 OR4K5Q8NGD3 323 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 HPS1Q92902 700 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 ZNF347Q96SE7 839 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 SH3GL3Q99963 347 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 C1orf198Q9H425 327 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 REV1Q9UBZ9 1251 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 MALRD1Q5VYJ5 2156 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 RTTNQ86VV8 2226 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 DNHD1Q96M86 4753 aa17.1■□□□□ 0.33
CLN6-206ENST00000565471 FBN1P35555 2871 aaKnown RBP17.1■□□□□ 0.33
CLN6-206ENST00000565471 SLC22A23A1A5C7 686 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 ELOVL7A1L3X0 281 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 ACADSP16219 412 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 AQP2P41181 271 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 CHN2P52757 468 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 SELENOWP63302 87 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 ST3GAL3Q11203 375 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 RIN1Q13671 783 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 C10orf128Q5T292 105 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 ARMC4Q5T2S8 1044 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 SLC30A7Q8NEW0 376 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 PRRC1Q96M27 445 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 SYT3Q9BQG1 590 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 TPK1Q9H3S4 243 aa17.09■□□□□ 0.33
CLN6-206ENST00000565471 ZNF446Q9NWS9 450 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms