RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GAAP10253 952 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF250P15622 560 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 SRP14P37108 136 aaKnown RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MAGEB1P43366 347 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 GPR6P46095 362 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MTPNP58546 118 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 GALK2Q01415 458 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 RUNX1T1Q06455 604 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 RBBP4Q09028 425 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 GKAP1Q5VSY0 366 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 DEF8Q6ZN54 512 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 RINLQ6ZS11 566 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 C1orf229Q6ZS94 237 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 C11orf65Q8NCR3 313 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 LRRC8CQ8TDW0 803 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF566Q969W8 418 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 TMEM186Q96B77 213 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 TSPAN32Q96QS1 320 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 SEPHS2Q99611 448 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 PRSS27Q9BQR3 290 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MRPL13Q9BYD1 178 aaKnown RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 NARFLQ9H6Q4 476 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 KAT8Q9H7Z6 458 aaKnown RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MEPEQ9NQ76 525 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 NANSQ9NR45 359 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF275Q9NSD4 429 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-213ENST00000565173 HIF1ANQ9NWT6 349 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 TREM2Q9NZC2 230 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 ZNF229Q9UJW7 825 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 FBXL3Q9UKT7 428 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 ANGPT4Q9Y264 503 aa7.34□□□□□ -1.23
CAPN3-213ENST00000565173 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 TRAPPC13A5PLN9 417 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 C17orf100A8MU93 164 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 HAX1O00165 279 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 DHHO43323 396 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 RNF13O43567 381 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 OR6A2O95222 327 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SNAP29O95721 258 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 AVPP01185 164 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 MSMBP08118 114 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 TSPAN19P0C672 248 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 FAM157BP0CG42 384 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SAGP10523 405 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 CCL2P13500 99 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF133P52736 654 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 ERVS71-1P61550 626 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 RPS23P62266 143 aaKnown RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 MELKQ14680 651 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 ALKBH6Q3KRA9 238 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 TTC33Q6PID6 262 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 DHDDSQ86SQ9 333 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 GLCCI1Q86VQ1 547 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 CPEB3Q8NE35 698 aaKnown RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SLC30A7Q8NEW0 376 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SEMA6DQ8NFY4 1073 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 OR4K5Q8NGD3 323 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 VANGL1Q8TAA9 524 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 STON2Q8WXE9 905 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 MCHR2Q969V1 340 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 TAMM41Q96BW9 452 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 MPP4Q96JB8 637 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 LRRC37BQ96QE4 947 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 CGREF1Q99674 301 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SLC19A3Q9BZV2 496 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 LPAR2Q9HBW0 351 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 TAAR3PQ9P1P4 343 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 METRNQ9UJH8 293 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 LEF1Q9UJU2 399 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-213ENST00000565173 SLC7A7Q9UM01 511 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 NDUFAF1Q9Y375 327 aa7.33□□□□□ -1.24
CAPN3-213ENST00000565173 A0A0A6YYJ9 748 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 A0A1W2PPW3 197 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 SLC22A23A1A5C7 686 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 KPNA4O00629 521 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 PPIHO43447 177 aaKnown RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 BCL10O95999 233 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 TFP02787 698 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 MMP7P09237 267 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 PCMT1P22061 227 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 PCGF2P35227 344 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 UGT2B15P54855 530 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 UCP2P55851 309 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 CCL8P80075 99 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 CYP51A1Q16850 503 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 NRN1LQ496H8 165 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM255AQ5JRV8 349 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 REP15Q6BDI9 236 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 RGS7BPQ6MZT1 257 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 CCDC80Q76M96 950 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 DPPA2Q7Z7J5 298 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 PATL1Q86TB9 770 aaKnown RBP7.32□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF519Q8TB69 540 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 SYNPRQ8TBG9 265 aa7.32□□□□□ -1.24
CAPN3-213ENST00000565173 GTF3AQ92664 365 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms