RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 KATNB1Q9BVA0 655 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 GRIP2Q9C0E4 1043 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 NOX3Q9HBY0 568 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 C20orf141Q9NUB4 165 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 MED31Q9Y3C7 131 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 FAM32AQ9Y421 112 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 PMF1-BGLAPU3KQ54 211 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 V9GYQ6 96 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.51
VPS9D1-204ENST00000565023 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 A0A1W2PRQ8 180 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 TCRBV5S2A0A599 114 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 HTR3EA5X5Y0 456 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 hCG_2039718K7EN88 272 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ACOT8O14734 319 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 DNAJC8O75937 253 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ATP5HO75947 161 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 BCL10O95999 233 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 OR4A8P0C604 315 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ASAH2BP0C7U1 165 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 PATE4P0C8F1 98 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ITGA2P17301 1181 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 AQP2P41181 271 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 PTDSS1P48651 473 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 RASSF2P50749 326 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CLRN1P58418 232 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 RPL18Q07020 188 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ZP4Q12836 540 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 TRAP1Q12931 704 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 DGCR6Q14129 220 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CARTPTQ16568 116 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 KRT80Q6KB66 452 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CLEC2AQ6UVW9 174 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 NHLRC1Q6VVB1 395 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 RNF113BQ8IZP6 322 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF525Q8N782 197 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 MOSPD2Q8NHP6 518 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ACOT11Q8WXI4 607 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF566Q969W8 418 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 MCUR1Q96AQ8 359 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 LRR1Q96L50 414 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 DHRS1Q96LJ7 313 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 IL1RAPQ9NPH3 570 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CA10Q9NS85 328 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 GLTPQ9NZD2 209 aa11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 CRNNQ9UBG3 495 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-204ENST00000565023 A0A087WUU8 490 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 IGHV2OR16-5A0A0B4J2B6 119 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 SH3PXD2BA1X283 911 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 INAFM1C9JVW0 142 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 GSC2O15499 205 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 IGKV3-15P01624 115 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 IGLV1-44P01699 117 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 H1F0P07305 194 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 BMP4P12644 408 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 IFI30P13284 250 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 ARR3P36575 388 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 GIPRP48546 466 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 SNRPD2P62316 118 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 HGFACQ04756 655 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 TOP3AQ13472 1001 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 GSG1Q2KHT4 349 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 C1QTNF12Q5T7M4 302 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 MBOAT2Q6ZWT7 520 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 PIWIL3Q7Z3Z3 882 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 SYT14Q8NB59 555 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 OR6X1Q8NH79 312 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 NANOS1Q8WY41 292 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 POP5Q969H6 163 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 TMEM54Q969K7 222 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 ZNF347Q96SE7 839 aa11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 CADM1Q9BY67 442 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 NSD1Q96L73 2696 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-204ENST00000565023 A0A1W2PRG6 482 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 DIRAS1O95057 198 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 RAB36O95755 333 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 FABP3P05413 133 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 QDPRP09417 244 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 TSPAN19P0C672 248 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 PAX7P23759 505 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 THBS4P35443 961 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SERPINF1P36955 418 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 MAGEA2P43356 314 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 RAB1AP62820 205 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 PPP2R2BQ00005 443 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 PRKCDQ05655 676 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 RUNX1T1Q06455 604 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 SNTB2Q13425 540 aaKnown RBP11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 LAPTM4AQ15012 233 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 ADIPOQQ15848 244 aa11.81□□□□□ -0.52
VPS9D1-204ENST00000565023 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms