RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 PGA3P0DJD8 388 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 SRD5A1P18405 259 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
CX3CL1-203ENST00000564948 ARFIP2P53365 341 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 CRYBA2P53672 197 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 CLRN1P58418 232 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 RAB39AQ14964 217 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 REP15Q6BDI9 236 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 TMEM53Q6P2H8 277 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 DEF8Q6ZN54 512 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
CX3CL1-203ENST00000564948 CALHM3Q86XJ0 350 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 SKA3Q8IX90 412 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 ZCCHC24Q8N2G6 241 aaKnown RBP13□□□□□ -0.33
CX3CL1-203ENST00000564948 TPK1Q9H3S4 243 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 CCDC134Q9H6E4 229 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 STX18Q9P2W9 335 aaKnown RBP13□□□□□ -0.33
CX3CL1-203ENST00000564948 REV1Q9UBZ9 1251 aa13□□□□□ -0.33
CX3CL1-203ENST00000564948 SLC22A23A1A5C7 686 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 CENPBD1B2RD01 187 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 FXYD1O00168 92 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 OR7A10O76100 309 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 TGFAP01135 160 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 IGF2P01344 180 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 QDPRP09417 244 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 TACSTD2P09758 323 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 DAP3P51398 398 aaKnown RBP12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 ZNF84P51523 738 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 KLF10Q13118 480 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 SLC36A2Q495M3 483 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 LRFN4Q6PJG9 635 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 ARIH2OSQ8N7S6 290 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 PCYOX1LQ8NBM8 494 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 NOXO1Q8NFA2 376 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 HPS1Q92902 700 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 SGTBQ96EQ0 304 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 SYT3Q9BQG1 590 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 C1orf198Q9H425 327 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 RNF121Q9H920 327 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 MEPEQ9NQ76 525 aaPredicted RBP12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 GID8Q9NWU2 228 aa12.99□□□□□ -0.33
CX3CL1-203ENST00000564948 A0A1W2PPW3 197 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 LRP5LA4QPB2 252 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 FAM220BPB1ANY3 271 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 PTHP01270 115 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 IGFBP1P08833 259 aaPredicted RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 PATE4P0C8F1 98 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 THRBP10828 461 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 FUT1P19526 365 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 TNFRSF1BP20333 461 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 APEX1P27695 318 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 THBS2P35442 1172 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 UGT2B15P54855 530 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SELENOVP59797 346 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 RPL18Q07020 188 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SF3A3Q12874 501 aaKnown RBP eCLIP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 FXNQ16595 210 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 MSMPQ1L6U9 139 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 FAM120AOSQ5T036 256 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 RGS7BPQ6MZT1 257 aaPredicted RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SLC16A14Q7RTX9 510 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 ZNF584Q8IVC4 421 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 NKAIN4Q8IVV8 208 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 PHC2Q8IXK0 858 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SLC30A7Q8NEW0 376 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 MCHR2Q969V1 340 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 CDH20Q9HBT6 801 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 SAR1AQ9NR31 198 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 INIPQ9NRY2 104 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 ZNF346Q9UL40 294 aaKnown RBP12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 MED31Q9Y3C7 131 aa12.98□□□□□ -0.33
CX3CL1-203ENST00000564948 MGRN1O60291 552 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 LILRA1O75019 489 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 F13BP05160 661 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 NR2C1P13056 603 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 IFNA8P32881 189 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 ALDH3B1P43353 468 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 PLP2Q04941 152 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 PIN1Q13526 163 aaPredicted RBP12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 RIN1Q13671 783 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 TBC1D28Q2M2D7 210 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 OR1J2Q8NGS2 313 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 FGFBP3Q8TAT2 258 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 C10orf82Q8WW14 230 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 ASB10Q8WXI3 467 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 ZNF583Q96ND8 569 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 ZNF347Q96SE7 839 aa12.97□□□□□ -0.33
CX3CL1-203ENST00000564948 LRMDAQ9H2I8 198 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms