RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 HLA-DQA2P01906 255 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 SP1P08047 785 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 SOX6P35712 828 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 FABP5Q01469 135 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 SRSF6Q13247 344 aaKnown RBP17.48■□□□□ 0.39
CLN6-205ENST00000564846 SYT14Q8NB59 555 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 PELI1Q96FA3 418 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 ADAD1Q96M93 576 aaKnown RBP17.48■□□□□ 0.39
CLN6-205ENST00000564846 KCTD7Q96MP8 289 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 TMED9Q9BVK6 235 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 TTTY10Q9BZA0 68 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 ZNF703Q9H7S9 590 aaPredicted RBP17.48■□□□□ 0.39
CLN6-205ENST00000564846 KLHL13Q9P2N7 655 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 LAMP5Q9UJQ1 280 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 GNG8Q9UK08 70 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 POLHQ9Y253 713 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 PMF1-BGLAPU3KQ54 211 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 A0A0J9YW62 118 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 NME2P1O60361 137 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 GAAP10253 952 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 NME2P22392 152 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 CLN3Q13286 438 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 CCDC58Q4VC31 144 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 WIPI1Q5MNZ9 446 aaPredicted RBP17.48■□□□□ 0.39
CLN6-205ENST00000564846 ZNF684Q5T5D7 378 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 C22orf42Q6IC83 251 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 PLEKHG7Q6ZR37 379 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 OR6X1Q8NH79 312 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 HAVCR2Q8TDQ0 301 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 HAS2Q92819 552 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 RBP7Q96R05 134 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 MRPL13Q9BYD1 178 aaKnown RBP17.48■□□□□ 0.39
CLN6-205ENST00000564846 HES7Q9BYE0 225 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 METTL15A6NJ78 407 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 TNFSF11O14788 317 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 LRRTM2O43300 516 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 IGHG1P01857 330 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 HPNP05981 417 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 TACSTD2P09758 323 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 CD46P15529 392 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ALOX5APP20292 161 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 AGFG1P52594 562 aaKnown RBP17.47■□□□□ 0.39
CLN6-205ENST00000564846 RAC3P60763 192 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 SIRPAP78324 504 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 EGR3Q06889 387 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 POU4F3Q15319 338 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 TBC1D25Q3MII6 688 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ZNF404Q494X3 552 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 DMKNQ6E0U4 476 aaPredicted RBP17.47■□□□□ 0.39
CLN6-205ENST00000564846 ARL9Q6T311 187 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ESPNLQ6ZVH7 1005 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ASB18Q6ZVZ8 466 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 OTOSQ8NHW6 89 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 MCFD2Q8NI22 146 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 SLC25A44Q96H78 314 aaPredicted RBP17.47■□□□□ 0.39
CLN6-205ENST00000564846 EMC6Q9BV81 110 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 MMP27Q9H306 513 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ST6GALNAC2Q9UJ37 374 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 DMXL1Q9Y485 3027 aa17.47■□□□□ 0.39
CLN6-205ENST00000564846 ZNF891A8MT65 544 aaPredicted RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 KLRC4-KLRK1H3BQV0 150 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 MAGEB4O15481 346 aaPredicted RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 OGG1O15527 345 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 RAMP1O60894 148 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 KHDRBS3O75525 346 aaKnown RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 GPANK1O95872 356 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 WT1P19544 449 aaPredicted RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 PTGS2P35354 604 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 CD97P48960 835 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 GFRA1P56159 465 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 NHLH1Q02575 133 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 MRPL28Q13084 256 aaKnown RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 ETFDHQ16134 617 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 THEM4Q5T1C6 240 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 RPL22L1Q6P5R6 122 aaKnown RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 DPY19L4Q7Z388 723 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 FAM220AQ7Z4H9 259 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 WDFY1Q8IWB7 410 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 FNDC8Q8TC99 324 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 SLC39A7Q92504 469 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 MFRPQ9BY79 579 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 TTTY12Q9BZ98 90 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 KCNN2Q9H2S1 579 aa17.46■□□□□ 0.39
CLN6-205ENST00000564846 ZNF552Q9H707 407 aaPredicted RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 COA3Q9Y2R0 106 aaPredicted RBP17.46■□□□□ 0.39
CLN6-205ENST00000564846 SLC35F4A4IF30 521 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 TRABD2BA6NFA1 517 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 ZNF593O00488 134 aaPredicted RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 GABRPO00591 440 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 SULT1C4O75897 302 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 RGS9O75916 674 aaPredicted RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 IL1AP01583 271 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 KRT8P05787 483 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 CD1AP06126 327 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 INHBBP09529 407 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 POU3F2P20265 443 aaPredicted RBP17.45■□□□□ 0.38
CLN6-205ENST00000564846 CLRN1P58418 232 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 ARG2P78540 354 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 GGNQ86UU5 652 aa17.45■□□□□ 0.38
CLN6-205ENST00000564846 MS4A15Q8N5U1 240 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms