RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SLC9A3P48764 834 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 PTH2RP49190 550 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 IDH3GP51553 393 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 CTXN1P60606 82 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 HIST3H3Q16695 136 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 TMPRSS11FQ6ZWK6 438 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 MCUR1Q96AQ8 359 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 B3GNT2Q9NY97 397 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZNF346Q9UL40 294 aaKnown RBP13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 ATP23Q9Y6H3 246 aa13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
CCNDBP1-203ENST00000562553 ARFGEF3Q5TH69 2177 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 SH3PXD2BA1X283 911 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 CALCRP30988 508 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 RRM2P31350 389 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 CDKN1AP38936 164 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 RPL27P61353 136 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 NAAAQ02083 359 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 FMODQ06828 376 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 NPRL3Q12980 569 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 TRIM25Q14258 630 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 Q5PR19 223 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 LCN8Q6JVE9 175 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 HDDC2Q7Z4H3 204 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 DTX2Q86UW9 622 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 CDK20Q8IZL9 346 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 LRRC75A-AS1Q8N1F1 130 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 CLDN22Q8N7P3 220 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 CCDC124Q96CT7 223 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 NMD3Q96D46 503 aaKnown RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 POM121Q96HA1 1249 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 GPA33Q99795 319 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 THTPAQ9BU02 230 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 GSX2Q9BZM3 304 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 DLL4Q9NR61 685 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZNF701Q9NV72 531 aaPredicted RBP13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 TMEM38BQ9NVV0 291 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
CCNDBP1-203ENST00000562553 RTTNQ86VV8 2226 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 CENPBD1B2RD01 187 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 OVOL3O00110 214 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 GADD45GO95257 159 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 SLC2A10O95528 541 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 CD79AP11912 226 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZNF133P52736 654 aaPredicted RBP13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ERVK-25P63136 954 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 PIGFQ07326 219 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ANKDD1AQ495B1 522 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 SKA3Q8IX90 412 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 FAM169BQ8N8A8 192 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZNF519Q8TB69 540 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 GTPBP3Q969Y2 492 aaKnown RBP13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZNF75AQ96N20 296 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 DHRS9Q9BPW9 319 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 KATNB1Q9BVA0 655 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 MUC13Q9H3R2 512 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 CXorf56Q9H5V9 222 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 SIGLEC7Q9Y286 467 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 ADAM18Q9Y3Q7 739 aa13.36□□□□□ -0.27
CCNDBP1-203ENST00000562553 PTP4A3O75365 173 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 PAX1P15863 534 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 PAX7P23759 505 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 TTKP33981 857 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 ARR3P36575 388 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 ACVR1BP36896 505 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 FABP6P51161 128 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 SMIM11AP58511 58 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 FXYD6P3P58550 94 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 CD47Q08722 323 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 TAF11Q15544 211 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 MTX3Q5HYI7 312 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 C11orf71Q6IPW1 123 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 PIWIL3Q7Z3Z3 882 aaKnown RBP13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 CCDC36Q8IYA8 594 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 SLC22A24Q8N4F4 322 aa13.35□□□□□ -0.27
CCNDBP1-203ENST00000562553 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms