RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RPL4P36578 427 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 ETV4P43268 484 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 GSTM5P46439 218 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 KRT6CP48668 564 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 BTG1P62324 171 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 SLC35A2P78381 396 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 PAX2Q02962 417 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 RBBP4Q09028 425 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 CEACAM7Q14002 265 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 LASP1Q14847 261 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 RAB39AQ14964 217 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 PPP1R7Q15435 360 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 OR7A5Q15622 319 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 FAM83EQ2M2I3 478 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZMAT1Q5H9K5 638 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 DCST2Q5T1A1 773 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 FAM71E1Q6IPT2 247 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZCCHC12Q6PEW1 402 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 C11orf88Q6PI97 169 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 CCDC137Q6PK04 289 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 RPS27LQ71UM5 84 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 GRINAQ7Z429 371 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 LRRC28Q86X40 367 aaPredicted RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 PTGR2Q8N8N7 351 aaPredicted RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 SCCPDHQ8NBX0 429 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 HIPK4Q8NE63 616 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ZFP28Q8NHY6 868 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 RHEBL1Q8TAI7 183 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 GEMIN6Q8WXD5 167 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 PMM1Q92871 262 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 THOC1Q96FV9 657 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 GPR78Q96P69 363 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 STACQ99469 402 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 CPNE1Q99829 537 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 ASCL2Q99929 193 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 RHOXF2Q9BQY4 288 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 NUDT16L1Q9BRJ7 211 aaKnown RBP4.39□□□□□ -1.71
HERC1-213ENST00000561359 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 FAM107BQ9H098 131 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 MEGF9Q9H1U4 602 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 SMURF1Q9HCE7 757 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 DUSP22Q9NRW4 184 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 DCAF16Q9NXF7 216 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 B3GNT2Q9NY97 397 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 PCTPQ9UKL6 214 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 PCDHGB4Q9UN71 923 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 TMED7Q9Y3B3 224 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 FAM96BQ9Y3D0 163 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 TEX264Q9Y6I9 313 aa4.39□□□□□ -1.71
HERC1-213ENST00000561359 A0A0U1RQK1 487 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 KIR2DS1A0A191URI9 304 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 PLSCR5A0PG75 271 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 TLDC2A0PJX2 215 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 TMEM72A0PK05 275 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CEACAM18A8MTB9 384 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ZNF99A8MXY4 864 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 NPIPB9F8W1W9 429 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RNASEK-C17orf49H0YIS7 233 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RPL36A-HNRNPH2H7BZ11 118 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 MANBAO00462 879 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 PPP6CO00743 305 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 DNALI1O14645 258 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 TM9SF1O15321 606 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 SLC43A1O75387 559 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 HMGN2P05204 90 aaKnown RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 CHRM4P08173 479 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 THRBP10828 461 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RPS2P15880 293 aaKnown RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 TNFRSF1AP19438 455 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CRABP2P29373 138 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CXCR5P32302 372 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 STX2P32856 288 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 MDH2P40926 338 aaKnown RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 EFNB2P52799 333 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ARL4CP56559 192 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 CLDN17P56750 224 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ERVS71-1P61550 626 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RAB1AP62820 205 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 CAMK2DQ13557 499 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 RASA2Q15283 850 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ZMYND11Q15326 602 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 GPR68Q15743 365 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ARHGAP11BQ3KRB8 267 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 SPDYAQ5MJ70 313 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 KLC3Q6P597 504 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 ZNF813Q6ZN06 617 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 EIF3MQ7L2H7 374 aaKnown RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 PIWIL3Q7Z3Z3 882 aaKnown RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 DDIASQ8IXT1 998 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 MUC20Q8N307 709 aaPredicted RBP4.38□□□□□ -1.71
HERC1-213ENST00000561359 LILRB2Q8N423 598 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 SPERTQ8NA61 448 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 FBXO36Q8NEA4 188 aa4.38□□□□□ -1.71
HERC1-213ENST00000561359 WFDC9Q8NEX5 89 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms