RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ARMCX1Q9P291 453 aa6.4□□□□□ -1.39
ZEB1-223ENST00000561304 NOX1Q9Y5S8 564 aa6.4□□□□□ -1.39
ZEB1-223ENST00000561304 LOC100653049A0A140TA62 436 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 FAM220BPB1ANY3 271 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 VWC2LB2RUY7 222 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 KRT34O76011 436 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 MT-ATP6P00846 226 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 CD79AP11912 226 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF14P17017 642 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 FUT1P19526 365 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 SERPINF1P36955 418 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 CSNK1A1P48729 337 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 SNRPD2P62316 118 aaKnown RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 CHRNB3Q05901 458 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 RUNX1T1Q06455 604 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 RPL18Q07020 188 aaKnown RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 PIGFQ07326 219 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 LOXL1Q08397 574 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 ZP4Q12836 540 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 SNTB2Q13425 540 aaKnown RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 PIN1Q13526 163 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 EFNB3Q15768 340 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 COQ5Q5HYK3 327 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 KRT80Q6KB66 452 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 TTC33Q6PID6 262 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF813Q6ZN06 617 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 DEF8Q6ZN54 512 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 SLC35D2Q76EJ3 337 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 MEX3DQ86XN8 651 aaKnown RBP6.39□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF584Q8IVC4 421 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 NUP37Q8NFH4 326 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 OR6N1Q8NGY5 312 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 TMEM255BQ8WV15 326 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 RCN3Q96D15 328 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 LRR1Q96L50 414 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 TNFRSF13CQ96RJ3 184 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 FOXB1Q99853 325 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 KCNS3Q9BQ31 491 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 PLK3Q9H4B4 646 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 NANSQ9NR45 359 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 YAE1D1Q9NRH1 226 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 C20orf141Q9NUB4 165 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 SH3GLB1Q9Y371 365 aa6.39□□□□□ -1.39
ZEB1-223ENST00000561304 IGKV1D-43A0A0B4J1Z2 117 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 IGHV4-61A0A0C4DH41 118 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 BBIP1A8MTZ0 92 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 B9A039 149 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 hCG_2039718K7EN88 272 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 RNF13O43567 381 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 TLX2O43763 284 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PDE5AO76074 875 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 F13BP05160 661 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 VIMP08670 466 aaKnown RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PGA4P0DJD7 388 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PGA3P0DJD8 388 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF35P13682 527 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SLC25A16P16260 332 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ARR3P36575 388 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 GIPRP48546 466 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PTDSS1P48651 473 aaKnown RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PPOXP50336 477 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 DSCR9P59020 149 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 VLDLRP98155 873 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 MYBPC1Q00872 1141 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ID3Q02535 119 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 CYLC2Q14093 348 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 GSG1Q2KHT4 349 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 MMEL1Q495T6 779 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 LRRC23Q53EV4 343 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 CYBRD1Q53TN4 286 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 INTS11Q5TA45 600 aaKnown RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 LRFN4Q6PJG9 635 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 LRP11Q86VZ4 500 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SKA3Q8IX90 412 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PAQR4Q8N4S7 273 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 OR4F15Q8NGB8 312 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 OR6X1Q8NH79 312 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 MOSPD2Q8NHP6 518 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SLC26A7Q8TE54 656 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF347Q96SE7 839 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 DOK1Q99704 481 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 VRK1Q99986 396 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ECSITQ9BQ95 431 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SOX7Q9BT81 388 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 MRPL37Q9BZE1 423 aaKnown RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 CCDC134Q9H6E4 229 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF442Q9H7R0 627 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 CMTM6Q9NX76 183 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 GLTPQ9NZD2 209 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 MYEF2Q9P2K5 600 aaKnown RBP6.38□□□□□ -1.39
ZEB1-223ENST00000561304 RIMS3Q9UJD0 308 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 ZNF229Q9UJW7 825 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 POFUT2Q9Y2G5 429 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SNX13Q9Y5W8 968 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
ZEB1-223ENST00000561304 SH3PXD2BA1X283 911 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms