RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZFAND2BQ8WV99 257 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 USP22Q9UPT9 525 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 GFERP55789 205 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 DCXRQ7Z4W1 244 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SLC15A4Q8N697 577 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 MORN4Q8NDC4 146 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 Q96M85 177 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 CSF3RQ99062 836 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 TRGV8A0A0C4DH27 118 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 GIFP27352 417 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 RPL11P62913 178 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 TRIB1Q96RU8 372 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 TET1Q8NFU7 2136 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 H3BMQ9 156 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 THBS1P07996 1170 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 GABRG2P18507 467 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ARNTP27540 789 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 KIR2DL3P43628 341 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 TMEM207Q6UWW9 146 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SLC43A2Q8N370 569 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 RASD2Q96D21 266 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 C1QTNF6Q9BXI9 259 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 FAM234AQ9H0X4 552 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SDHBP21912 280 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 HTR2CP28335 458 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 RPS23P62266 143 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 HSF1Q00613 529 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 DUSP2Q05923 314 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 EDDM3AQ14507 147 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 Q6ZNB5 142 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 Q6ZS52 159 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SCCPDHQ8NBX0 429 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ATP23Q9Y6H3 246 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SGCEO43556 437 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 GM2AP17900 193 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 PTAFRP25105 342 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 HTR1FP30939 366 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 KRBOX4Q5JUW0 171 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF511Q8NB15 262 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 NDRG4Q9ULP0 352 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 MRPS28Q9Y2Q9 187 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 STRCP1A6NGW2 1772 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 SLC2A1P11166 492 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 CDK4P11802 303 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 TNK1Q13470 666 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 APOOLQ6UXV4 268 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF679Q8IYX0 411 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 GGHQ92820 318 aa12.37□□□□□ -0.43
TRAF3-208ENST00000560371 PPIL3Q9H2H8 161 aaKnown RBP12.37□□□□□ -0.43
TRAF3-208ENST00000560371 NBASA2RRP1 2371 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 NOTOA8MTQ0 251 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 UPK1BO75841 260 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 CCL7P80098 99 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 DUSP7Q16829 419 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 AGBL4Q5VU57 503 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 BBS1Q8NFJ9 593 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 PFDN5Q99471 154 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 H7C1Q1 480 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SPDEFO95238 335 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 OR8G1Q15617 311 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 Q6ZPB1 254 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 C19orf53Q9UNZ5 99 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 HEATR5BQ9P2D3 2071 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 TNFRSF10AO00220 468 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 EFSO43281 561 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 DEFA4P12838 97 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 NDUFB7P17568 137 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 Q6ZTK2 550 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 FGGYQ96C11 551 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF582Q96NG8 517 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SEMA4CQ9C0C4 833 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SNX11Q9Y5W9 270 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 OR2J2O76002 312 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 ZIC2O95409 532 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 SERPINA7P05543 415 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 DAPP51397 102 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 UTP4Q969X6 686 aaKnown RBP12.36□□□□□ -0.43
TRAF3-208ENST00000560371 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
TRAF3-208ENST00000560371 CHST11Q9NPF2 352 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms