RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TRMUO75648 421 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 OR5F1O95221 314 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 SLC2A10O95528 541 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 STAMBPO95630 424 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 ALDH3B1P43353 468 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 SRSF2Q01130 221 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 FMODQ06828 376 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 TRIP10Q15642 601 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 FXNQ16595 210 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 HIST3H3Q16695 136 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 ALKBH6Q3KRA9 238 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 SLC15A3Q8IY34 581 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 RBM15BQ8NDT2 890 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 OR4K5Q8NGD3 323 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 TMEM239Q8WW34 195 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 ASB10Q8WXI3 467 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 MCHR2Q969V1 340 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 MRPL24Q96A35 216 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 MSI2Q96DH6 328 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 SGTBQ96EQ0 304 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 TSPAN32Q96QS1 320 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 PIMREGQ9BSJ6 248 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 MRPL13Q9BYD1 178 aaKnown RBP15.26■□□□□ 0.03
HDDC3-205ENST00000559898 SLC19A3Q9BZV2 496 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 CAPN7Q9Y6W3 813 aa15.26■□□□□ 0.03
HDDC3-205ENST00000559898 NME4O00746 187 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 FFAR1O14842 300 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 BCL10O95999 233 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 HIST1H2ABP04908 130 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CSF3P09919 207 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 TSPAN19P0C672 248 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 DAOP14920 347 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 MAKP20794 623 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 PAX7P23759 505 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 IGFBP5P24593 272 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CDAP32320 146 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 FHL1Q13642 323 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CYB5R2Q6BCY4 276 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 HIST3H2AQ7L7L0 130 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 TSEN54Q7Z6J9 526 aaKnown RBP15.25■□□□□ 0.03
HDDC3-205ENST00000559898 IGFN1Q86VF2 1251 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CCDC36Q8IYA8 594 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 OR2T12Q8NG77 320 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 RASSF5Q8WWW0 418 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 HDAC2Q92769 488 aaKnown RBP15.25■□□□□ 0.03
HDDC3-205ENST00000559898 HIST1H2ACQ93077 130 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 KCNK17Q96T54 332 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 SH3GL1Q99961 368 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CCDC134Q9H6E4 229 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 MAN2C1Q9NTJ4 1040 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 BAG5Q9UL15 447 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 CMAHPQ9Y471 501 aa15.25■□□□□ 0.03
HDDC3-205ENST00000559898 LOC390937A0A1W2PQ73 354 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 ELOVL7A1L3X0 281 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 RAB36O95755 333 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 CLPTM1O96005 669 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 FAM157BP0CG42 384 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 COX4I1P13073 169 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 CLRN1P58418 232 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 ARMC4Q5T2S8 1044 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 ERICH5Q6P6B1 374 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 CXXC5Q7LFL8 322 aaKnown RBP15.24■□□□□ 0.03
HDDC3-205ENST00000559898 PIWIL3Q7Z3Z3 882 aaKnown RBP15.24■□□□□ 0.03
HDDC3-205ENST00000559898 LRRC18Q8N456 261 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 NOXO1Q8NFA2 376 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 GTF3AQ92664 365 aaKnown RBP15.24■□□□□ 0.03
HDDC3-205ENST00000559898 NMD3Q96D46 503 aaKnown RBP15.24■□□□□ 0.03
HDDC3-205ENST00000559898 SEPHS2Q99611 448 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 CHODLQ9H9P2 273 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 DYNLRB1Q9NP97 96 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 INIPQ9NRY2 104 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 UGT2A1Q9Y4X1 527 aa15.24■□□□□ 0.03
HDDC3-205ENST00000559898 LILRA1O75019 489 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 NCR1O76036 304 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 UBL3O95164 117 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 NPPAP01160 153 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 HPXP02790 462 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 APEHP13798 732 aaKnown RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 ACADSP16219 412 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 COL8A2P25067 703 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 RBM34P42696 430 aaKnown RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 SELENOWP63302 87 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 LIPEQ05469 1076 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 HNRNPA0Q13151 305 aaKnown RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 TOP3AQ13472 1001 aaPredicted RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 MAPRE2Q15555 327 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 CHRFAM7AQ494W8 412 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 IQCCQ4KMZ1 466 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 TMEM255AQ5JRV8 349 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 ELFN2Q5R3F8 820 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 C8orf82Q6P1X6 216 aaPredicted RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 TBPL2Q6SJ96 375 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 NABP1Q96AH0 204 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 MOV10Q9HCE1 1003 aaKnown RBP15.23■□□□□ 0.03
HDDC3-205ENST00000559898 GID8Q9NWU2 228 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 ATRQ13535 2644 aa15.23■□□□□ 0.03
HDDC3-205ENST00000559898 NDUFS8O00217 210 aa15.22■□□□□ 0.03
HDDC3-205ENST00000559898 WNT9BO14905 357 aa15.22■□□□□ 0.03
HDDC3-205ENST00000559898 IGHG1P01857 330 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms