RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GGTLC2Q14390 218 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 RNPS1Q15287 305 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 HIST3H3Q16695 136 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 LCN1P1Q5VSP4 162 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 GTF2IRD2BQ6EKJ0 949 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 GTF2IRD2Q86UP8 949 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 NOXO1Q8NFA2 376 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 PROKR2Q8NFJ6 384 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 TMEM80Q96HE8 168 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 RNF122Q9H9V4 155 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 BCO1Q9HAY6 547 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 PCDHGB1Q9Y5G3 927 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 ITPR1Q14643 2758 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ARHGAP21Q5T5U3 1957 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 IGLV1-36A0A0B4J1U3 117 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 SLC22A20A6NK97 555 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 J3QRE1 110 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 AKAP8O43823 692 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 SLC16A7O60669 478 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 FADS2O95864 444 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 TGM6O95932 706 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 DCKP27707 260 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 NTF4P34130 210 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CLRN1P58418 232 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 THEM4Q5T1C6 240 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ZGRF1Q86YA3 2104 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 OR4F15Q8NGB8 312 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 OR5M9Q8NGP3 310 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 OR6K6Q8NGW6 343 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 FNDC8Q8TC99 324 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ZNF775Q96BV0 537 aaPredicted RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 SNRNP40Q96DI7 357 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 ZMYND19Q96E35 227 aaPredicted RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 DOCK7Q96N67 2140 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 RBP7Q96R05 134 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CDCA4Q9BXL8 241 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 RACGAP1Q9H0H5 632 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ADGRL4Q9HBW9 690 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
HERC1-205ENST00000559886 SNX5Q9Y5X3 404 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 COMMD3-BMI1R4GMX3 469 aa10.82□□□□□ -0.68
HERC1-205ENST00000559886 ZNF724A8MTY0 619 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 FAM171A2A8MVW0 826 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 AHRRA9YTQ3 701 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 APOL3O95236 402 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 FCGR2AP12318 317 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 PTGS2P35354 604 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 ATP6V1E1P36543 226 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 FMODQ06828 376 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 POU4F2Q12837 409 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 CARD17Q5XLA6 110 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 DNM1P34Q6PK57 102 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 SHFQ7M4L6 423 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 OR51G2Q8NGK0 314 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 TMEM45BQ96B21 275 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 SLX1AQ9BQ83 275 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 RERGLQ9H628 205 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 EMC3Q9P0I2 261 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 FREM1Q5H8C1 2179 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 RAB36O95755 333 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 TFAP2AP05549 437 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 SBK2P0C263 348 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 PCMT1P22061 227 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 CENPAP49450 140 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 SELENOPP49908 381 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 EMX1Q04741 257 aaPredicted RBP10.81□□□□□ -0.68
HERC1-205ENST00000559886 IRF3Q14653 427 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 ETFDHQ16134 617 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 RNLSQ5VYX0 342 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 POMGNT2Q8NAT1 580 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 INTS12Q96CB8 462 aaKnown RBP10.81□□□□□ -0.68
HERC1-205ENST00000559886 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 GLTPQ9NZD2 209 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 FOXD3Q9UJU5 478 aaPredicted RBP10.81□□□□□ -0.68
HERC1-205ENST00000559886 SPTA1P02549 2419 aa10.81□□□□□ -0.68
HERC1-205ENST00000559886 IGKV1D-43A0A0B4J1Z2 117 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ERVH48-1M5A8F1 160 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 IGHA1P01876 353 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 NR2C1P13056 603 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 BLVRAP53004 296 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 LRFN4Q6PJG9 635 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 LYPD4Q6UWN0 246 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 KCTD8Q6ZWB6 473 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 AAED1Q7RTV5 226 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 TUSC5Q8IXB3 177 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 C20orf196Q8IYI0 205 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 SVOPQ8N4V2 548 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 MCHR2Q969V1 340 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 JAM3Q9BX67 310 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ATRXP46100 2492 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 KHDRBS3O75525 346 aaKnown RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 YES1P07947 543 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ZNF133P52736 654 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms