RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 TMIGD3P0DMS9 266 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 GLI4P10075 376 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 CTLA4P16410 223 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SPI1P17947 270 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SLC25A1P53007 311 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 TEKQ02763 1124 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 PHYHD1Q5SRE7 291 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 AADACL4Q5VUY2 407 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 NXNL2Q5VZ03 156 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 LAIR2Q6ISS4 152 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 DNM1P34Q6PK57 102 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 SEM1Q6ZVN7 128 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 MEPCEQ7L2J0 689 aaKnown RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 C20orf196Q8IYI0 205 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 OR6K6Q8NGW6 343 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 OR2T4Q8NH00 348 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 MBD3L2Q8NHZ7 208 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 PTP4A1Q93096 173 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 RFKQ969G6 155 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 TMEM54Q969K7 222 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 FOXN4Q96NZ1 517 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 SNX18Q96RF0 628 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 TTYH2Q9BSA4 534 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
TPM1-221ENST00000559831 NMNAT2Q9BZQ4 307 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 NUAK2Q9H093 628 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 GP6Q9HCN6 339 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 GLTPQ9NZD2 209 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 B9D1Q9UPM9 204 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 OSGIN2Q9Y236 505 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 ITPR1Q14643 2758 aa9.24□□□□□ -0.93
TPM1-221ENST00000559831 IGKV1D-43A0A0B4J1Z2 117 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 SH3D21A4FU49 640 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 CCDC182A6NF36 153 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 CENPBD1B2RD01 187 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 DCTN6O00399 190 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 AHCYL1O43865 530 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 KHDRBS3O75525 346 aaKnown RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 UPK3AO75631 287 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 GPANK1O95872 356 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 IL2RAP01589 272 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 HLA-DQA2P01906 255 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 QDPRP09417 244 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 NR2C1P13056 603 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 SLC2A5P22732 501 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 EDNRAP25101 427 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 CRABP1P29762 137 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 CHN2P52757 468 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 PMPCAQ10713 525 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 FOXF2Q12947 444 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 MRPL49Q13405 166 aaKnown RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 ETFDHQ16134 617 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 SLC25A30Q5SVS4 291 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 THEM4Q5T1C6 240 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 TSPO2Q5TGU0 170 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 VWA1Q6PCB0 445 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 UGT2A3Q6UWM9 527 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 B3GLCTQ6Y288 498 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 NCCRP1Q6ZVX7 275 aaPredicted RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 FAM214BQ7L5A3 538 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 OR6V1Q8N148 313 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 UBE2J2Q8N2K1 259 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 ZNRF4Q8WWF5 429 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 MCHR2Q969V1 340 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 ZMYND19Q96E35 227 aaPredicted RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 RNFT2Q96EX2 444 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 ALKBH3Q96Q83 286 aaPredicted RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 ULBP2Q9BZM5 246 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 SLCO5A1Q9H2Y9 848 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 SCN3BQ9NY72 215 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 UPB1Q9UBR1 384 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 PRSS50Q9UI38 385 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 MYRFQ9Y2G1 1151 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 COA3Q9Y2R0 106 aaPredicted RBP9.23□□□□□ -0.93
TPM1-221ENST00000559831 FKBP7Q9Y680 259 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 MYO7BQ6PIF6 2116 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 BOD1L1Q8NFC6 3051 aa9.23□□□□□ -0.93
TPM1-221ENST00000559831 IGLV1-36A0A0B4J1U3 117 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TVP23AA6NH52 213 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 SLC22A31A6NKX4 558 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TOXO94900 526 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 GLCEO94923 617 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 APOL3O95236 402 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 MRPL3P09001 348 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 DBTP11182 482 aaKnown RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 GSTT1P30711 240 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 HTR1FP30939 366 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TIMP3P35625 211 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 ATP6V1E1P36543 226 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 CA7P43166 264 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 KIR2DL2P43627 348 aaPredicted RBP9.22□□□□□ -0.93
TPM1-221ENST00000559831 OR3A2P47893 321 aa9.22□□□□□ -0.93
TPM1-221ENST00000559831 TLE1Q04724 770 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms