RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 QDPRP09417 244 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 CECR9P0C854 216 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 DANCRP0C864 163 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PGA3P0DJD8 388 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PAX1P15863 534 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ACADSP16219 412 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 HOXB6P17509 224 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 NOS3P29474 1203 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RRM2P31350 389 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 MSX2P35548 267 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 ACVR1BP36896 505 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SERPINF1P36955 418 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 AQP2P41181 271 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PTDSS1P48651 473 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 RASSF2P50749 326 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 IDH3GP51553 393 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 NUDT6P53370 316 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SELENOVP59797 346 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 CTXN1P60606 82 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RPL27P61353 136 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 PCBD1P61457 104 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RPS23P62266 143 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 SNRPD2P62316 118 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 RAB1AP62820 205 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TUBA1BP68363 451 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TUBA4AP68366 448 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SPIBQ01892 262 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 NAAAQ02083 359 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PLP2Q04941 152 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PIGFQ07326 219 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SPOCK1Q08629 439 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TOP3AQ13472 1001 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 MELKQ14680 651 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ZBED5Q49AG3 693 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 FAM98BQ52LJ0 330 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 MTX3Q5HYI7 312 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 THEM4Q5T1C6 240 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TMPRSS11FQ6ZWK6 438 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TUBA1AQ71U36 451 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ZNF627Q7L945 461 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 LINGO2Q7L985 606 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SLC16A14Q7RTX9 510 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TRPM8Q7Z2W7 1104 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 BIVMQ86UB2 503 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 DTX2Q86UW9 622 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TSPYL5Q86VY4 417 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 LSRQ86X29 649 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 DHFR2Q86XF0 187 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ALDH16A1Q8IZ83 802 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SLC22A24Q8N4F4 322 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 FAM156AQ8NDB6 213 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RBM15BQ8NDT2 890 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 NOXO1Q8NFA2 376 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 NUP37Q8NFH4 326 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 OR1J2Q8NGS2 313 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 OR52J3Q8NH60 311 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 LILRB1Q8NHL6 650 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 SLC7A13Q8TCU3 470 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 NEUROG1Q92886 237 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TMEM54Q969K7 222 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 MCHR2Q969V1 340 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ASB9Q96DX5 294 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ZNF837Q96EG3 531 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 FAM46AQ96IP4 442 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 C18orf12Q96KH6 178 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 Q96MF0 132 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TRIM15Q9C019 465 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 C1orf21Q9H246 121 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TXNIPQ9H3M7 391 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 C1orf198Q9H425 327 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 RNF121Q9H920 327 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 SMURF2Q9HAU4 748 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 CCNB1IP1Q9NPC3 277 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 IL1RAPQ9NPH3 570 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ARL8BQ9NVJ2 186 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 NDUFAF4Q9P032 175 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ACTR3BQ9P1U1 418 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 CRNNQ9UBG3 495 aaPredicted RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 CD300AQ9UGN4 299 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TMCC3Q9ULS5 477 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 PRPF19Q9UMS4 504 aaKnown RBP3.81□□□□□ -1.8
SNX1-205ENST00000559339 V9GYQ6 96 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 ARID1AO14497 2285 aa3.81□□□□□ -1.8
SNX1-205ENST00000559339 TRAV27A0A087WT01 109 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 B9A039 149 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 H7C417 338 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 GYG2O15488 501 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 PIP5K1CO60331 668 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 OR10H3O60404 316 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 TRMUO75648 421 aaKnown RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 PDE5AO76074 875 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 PRSS23O95084 383 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 NDUFB2O95178 105 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 F12P00748 615 aaPredicted RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 TP53P04637 393 aaPredicted RBP3.8□□□□□ -1.8
SNX1-205ENST00000559339 SERPINA5P05154 406 aa3.8□□□□□ -1.8
SNX1-205ENST00000559339 CD14P08571 375 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms