RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ANXA8L1Q5VT79 327 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 C22orf42Q6IC83 251 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 FRMPD2BQ6IN97 320 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 COX15Q7KZN9 410 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 COMMD1Q8N668 190 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 NPBQ8NG41 125 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 OR1S2Q8NGQ3 325 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 GEMIN6Q8WXD5 167 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 TMEM54Q969K7 222 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 SGK3Q96BR1 496 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 MED8Q96G25 268 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 ZIM3Q96PE6 472 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 OR2M2Q96R28 347 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 IQCGQ9H095 443 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 GEMIN7Q9H840 131 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 CTPS2Q9NRF8 586 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 GCNT4Q9P109 453 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 LSM7Q9UK45 103 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 ING4Q9UNL4 249 aa3.05□□□□□ -1.92
CASC4-206ENST00000558847 PHF3Q92576 2039 aaKnown RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 RAI1Q7Z5J4 1906 aaPredicted RBP3.05□□□□□ -1.92
CASC4-206ENST00000558847 AKNAQ7Z591 1439 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 A0A1B0GUA9 196 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 NKX2-6A6NCS4 301 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 FGF4P08620 206 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 IGHV3-43DP0DP04 118 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 MYL2P10916 166 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 ZNF19P17023 458 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 HMOX2P30519 316 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 NUDT1P36639 197 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 MRPL19P49406 292 aaKnown RBP3.04□□□□□ -1.92
CASC4-206ENST00000558847 TCP10Q12799 353 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 SMARCB1Q12824 385 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 DAZ2Q13117 558 aaKnown RBP3.04□□□□□ -1.92
CASC4-206ENST00000558847 AQP6Q13520 282 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 SF3A2Q15428 464 aaKnown RBP3.04□□□□□ -1.92
CASC4-206ENST00000558847 MPPED2Q15777 294 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 ANKRD26P1Q6NSI1 321 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 ZNF836Q6ZNA1 936 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 C6orf120Q7Z4R8 191 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 GABRG1Q8N1C3 465 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 DTX3LQ8TDB6 740 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 KIFAP3Q92845 792 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 MYDGFQ969H8 173 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 P2RX4Q99571 388 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 LINC00597Q9H2U6 94 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 CLMPQ9H6B4 373 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 TMEM165Q9HC07 324 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 DAZ3Q9NR90 486 aaKnown RBP3.04□□□□□ -1.92
CASC4-206ENST00000558847 C20orf96Q9NUD7 363 aaPredicted RBP3.04□□□□□ -1.92
CASC4-206ENST00000558847 ZNF226Q9NYT6 803 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 PCYOX1Q9UHG3 505 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 KIAA1257Q9ULG3 409 aa3.04□□□□□ -1.92
CASC4-206ENST00000558847 ZNF318Q5VUA4 2279 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 TRBV9A0A0B4J1U6 114 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 OR2AG2A6NM03 316 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 ZNF726A6NNF4 738 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 H7C0C1 242 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 CASC3O15234 703 aaKnown RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 CLPXO76031 633 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 ANXA5P08758 320 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 ZDHHC11BP0C7U3 371 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 NR2C1P13056 603 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 GTF2E2P29084 291 aaKnown RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 CTRLP40313 264 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 RORCP51449 518 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 TWF1Q12792 350 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 FZD2Q14332 565 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 SGCAQ16586 387 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 ZNF630Q2M218 657 aaPredicted RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 PGGHGQ32M88 737 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 XKR4Q5GH76 650 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 TMEM255AQ5JRV8 349 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 REEP3Q6NUK4 255 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 ACP7Q6ZNF0 438 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 OTUD6AQ7L8S5 288 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 C11orf53Q8IXP5 236 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 MREGQ8N565 214 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 FBXL13Q8NEE6 735 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 OR10R2Q8NGX6 335 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 SLC7A13Q8TCU3 470 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 EXOSC8Q96B26 276 aaKnown RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 C8orf44Q96CB5 159 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 AURKBQ96GD4 344 aaPredicted RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 TSSK3Q96PN8 268 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 SLC29A1Q99808 456 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 FGF20Q9NP95 211 aaPredicted RBP3.03□□□□□ -1.92
CASC4-206ENST00000558847 SLC25A37Q9NYZ2 338 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 VANGL2Q9ULK5 521 aa3.03□□□□□ -1.92
CASC4-206ENST00000558847 GLYATL1P3A0A0U1RQE8 302 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 A0A1B0GVI7 797 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 SERTM2A0A1B0GWG4 89 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 PINLYPA6NC86 204 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 LYRM9A8MSI8 78 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 CHST1O43916 411 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 HUS1O60921 280 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 BGLAPP02818 100 aa3.02□□□□□ -1.93
CASC4-206ENST00000558847 ERCC1P07992 297 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms