RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 LNX2Q8N448 690 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 OR52E2Q8NGJ4 325 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 KISS1RQ969F8 398 aaPredicted RBP18.73■□□□□ 0.59
CASC4-204ENST00000557945 RBP7Q96R05 134 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 TAS2R16Q9NYV7 291 aa18.73■□□□□ 0.59
CASC4-204ENST00000557945 PRSS37A4D1T9 235 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 PRSS44E7EML9 344 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 C16orf97H3BN30 126 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 ITGA5P08648 1049 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 NR2C1P13056 603 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 COX5AP20674 150 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 IL32P24001 234 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 PEX2P28328 305 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 GIPRP48546 466 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 RAD23AP54725 363 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 CEACAM16Q2WEN9 425 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 TMEM236Q5W0B7 351 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 LEG1Q6P5S2 330 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 LRFN4Q6PJG9 635 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 BHLHA15Q7RTS1 189 aaPredicted RBP18.72■□□□□ 0.59
CASC4-204ENST00000557945 MCHR2Q969V1 340 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 TEX12Q9BXU0 123 aa18.72■□□□□ 0.59
CASC4-204ENST00000557945 NPDC1Q9NQX5 325 aaPredicted RBP18.72■□□□□ 0.59
CASC4-204ENST00000557945 KLF2Q9Y5W3 355 aaPredicted RBP18.72■□□□□ 0.59
CASC4-204ENST00000557945 SLC22A23A1A5C7 686 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 RAD51DO75771 328 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 PSMB1P20618 241 aaKnown RBP18.71■□□□□ 0.59
CASC4-204ENST00000557945 GRK5P34947 590 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 UGT2B10P36537 528 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 CDKN2AP42771 156 aaKnown RBP18.71■□□□□ 0.59
CASC4-204ENST00000557945 TGFBR3Q03167 851 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 FMODQ06828 376 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.71■□□□□ 0.59
CASC4-204ENST00000557945 HIST3H3Q16695 136 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 ZIK1Q3SY52 487 aaPredicted RBP18.71■□□□□ 0.59
CASC4-204ENST00000557945 ACSM5Q6NUN0 579 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 PTCHD4Q6ZW05 846 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 GALNT4Q8N4A0 578 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 ZNF433Q8N7K0 673 aaPredicted RBP18.71■□□□□ 0.59
CASC4-204ENST00000557945 SDR9C7Q8NEX9 313 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 FNDC8Q8TC99 324 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 ZNF837Q96EG3 531 aaPredicted RBP18.71■□□□□ 0.59
CASC4-204ENST00000557945 NMNAT3Q96T66 252 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 HDHD5Q9BXW7 423 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 GPR52Q9Y2T5 361 aa18.71■□□□□ 0.59
CASC4-204ENST00000557945 RPL36A-HNRNPH2H7BZ11 118 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 C19orf84I3L1E1 186 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 DHHO43323 396 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 AHCYL1O43865 530 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 SLC2A10O95528 541 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 RENP00797 406 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 IFNGP01579 166 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 POLR2IP36954 125 aaKnown RBP18.7■□□□□ 0.58
CASC4-204ENST00000557945 ARF1P84077 181 aaKnown RBP18.7■□□□□ 0.58
CASC4-204ENST00000557945 CDK5Q00535 292 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 NPRL3Q12980 569 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 SNTB1Q13884 538 aaKnown RBP18.7■□□□□ 0.58
CASC4-204ENST00000557945 PTGES3Q15185 160 aaKnown RBP18.7■□□□□ 0.58
CASC4-204ENST00000557945 THEM4Q5T1C6 240 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 NSMAFQ92636 917 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 GABARAPL3Q9BY60 117 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 ACTR6Q9GZN1 396 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 SYT4Q9H2B2 425 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 RERGLQ9H628 205 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 SLC25A19Q9HC21 320 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 KLHL21Q9UJP4 597 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 TENM4Q6N022 2769 aa18.7■□□□□ 0.58
CASC4-204ENST00000557945 RIIAD1A6NNX1 92 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 CASQ2O14958 399 aaPredicted RBP18.69■□□□□ 0.58
CASC4-204ENST00000557945 ATP6V1G2O95670 118 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 CLDN1O95832 211 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 HMGN1P05114 100 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 EPHA2P29317 976 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 ZNF84P51523 738 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 RIPK1Q13546 671 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 OGFRL1Q5TC84 451 aaPredicted RBP18.69■□□□□ 0.58
CASC4-204ENST00000557945 STEAP2Q8NFT2 490 aa18.69■□□□□ 0.58
CASC4-204ENST00000557945 NMD3Q96D46 503 aaKnown RBP18.69■□□□□ 0.58
CASC4-204ENST00000557945 VSX1Q9NZR4 365 aaPredicted RBP18.69■□□□□ 0.58
CASC4-204ENST00000557945 GCN1Q92616 2671 aaKnown RBP18.69■□□□□ 0.58
CASC4-204ENST00000557945 IGKV1D-43A0A0B4J1Z2 117 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 ZNF99A8MXY4 864 aaPredicted RBP18.68■□□□□ 0.58
CASC4-204ENST00000557945 SLC16A7O60669 478 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SEC14L2O76054 403 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 CCKARP32238 428 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 PCYT1AP49585 367 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SH3BGRP55822 239 aaPredicted RBP18.68■□□□□ 0.58
CASC4-204ENST00000557945 SORDQ00796 357 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 STK11Q15831 433 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SLC25A47Q6Q0C1 308 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 CYB561A3Q8NBI2 242 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 SLC37A3Q8NCC5 494 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 S100PBPQ96BU1 408 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 PLEKHA8Q96JA3 519 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 C8orf4Q9NR00 106 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 CMC2Q9NRP2 79 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 TVP23BQ9NYZ1 205 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 A0A096LPE4 126 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 A0A1W2PPZ6 126 aa18.68■□□□□ 0.58
CASC4-204ENST00000557945 ZAR1LA6NP61 321 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms