RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CISD1Q9NZ45 108 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 CRNNQ9UBG3 495 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 MAST4O15021 2626 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 CREBBPQ92793 2442 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 SH3PXD2BA1X283 911 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 A6NIZ1 184 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 DHHO43323 396 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 MGRN1O60291 552 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 SMPD2O60906 423 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ATP5HO75947 161 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 QDPRP09417 244 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CBR1P16152 277 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 HOXB6P17509 224 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RRM2P31350 389 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ARR3P36575 388 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RPL4P36578 427 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CAPZA2P47755 286 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 OMPP47874 163 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RASSF2P50749 326 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF84P51523 738 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CDH11P55287 796 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RAP1BP61224 184 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RPL27P61353 136 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 RAP1AP62834 184 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 MS4A2Q01362 244 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CHRNB3Q05901 458 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 TESK1Q15569 626 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ARMC4Q5T2S8 1044 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 SPNS3Q6ZMD2 512 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 MEX3DQ86XN8 651 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 LRRC75A-AS1Q8N1F1 130 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 LRRC75AQ8NAA5 344 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 TMEM171Q8WVE6 324 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 MCHR2Q969V1 340 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CCDC124Q96CT7 223 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 FUZQ9BT04 418 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ALG12Q9BV10 488 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 CXorf56Q9H5V9 222 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 DENND2DQ9H6A0 471 aaPredicted RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF346Q9UL40 294 aaKnown RBP10.9□□□□□ -0.66
SLIRP-211ENST00000557623 AKAP6Q13023 2319 aa10.9□□□□□ -0.67
SLIRP-211ENST00000557623 CDC42EP2O14613 210 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SEC14L2O76054 403 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 UBL3O95164 117 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 NDUFB2O95178 105 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 FARS2O95363 451 aaKnown RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 IGKV3-15P01624 115 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 ACVR1BP36896 505 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 MAGEA2P43356 314 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 LIMS1P48059 325 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 TUBA1BP68363 451 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 TUBA4AP68366 448 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 BNIP1Q12981 228 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 FHL1Q13642 323 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SEC23BQ15437 767 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 LRFN4Q6PJG9 635 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 TUBA1AQ71U36 451 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 DPPA2Q7Z7J5 298 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SYT14Q8NB59 555 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SMAP2Q8WU79 429 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-211ENST00000557623 CLPTM1LQ96KA5 538 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 KATNB1Q9BVA0 655 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SIGLEC7Q9Y286 467 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 TEX15Q9BXT5 2789 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 CADP27708 2225 aa10.89□□□□□ -0.67
SLIRP-211ENST00000557623 IGHV1-18A0A0C4DH31 117 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 UNC119BA6NIH7 251 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 AQP12BA6NM10 295 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 ACOT8O14734 319 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 OR10H3O60404 316 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 PTP4A3O75365 173 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 CRYAAP02489 173 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 CD14P08571 375 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 RAP2AP10114 183 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 CD79AP11912 226 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 B4GALT1P15291 398 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 HMGA2P52926 109 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 RUNX1T1Q06455 604 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
SLIRP-211ENST00000557623 CD47Q08722 323 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms