RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TMED7-TICAM2A0A0A6YYA0 188 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ARPC4-TTLL3A0A0A6YYG9 625 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 IGHV2OR16-5A0A0B4J2B6 119 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ZC3H12DA2A288 527 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A18PA6NE21 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A16PA6NEW6 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 CLDN24A6NM45 220 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A9PA6NNJ1 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A5PA8MXJ8 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF587BE7ETH6 402 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 AZIN1O14977 448 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 CFLARO15519 480 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 PLIN3O60664 434 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 KRT33AO76009 404 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 AKR7A3O95154 331 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 AK1P00568 194 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 IGKV3-15P01624 115 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 MSMBP08118 114 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A15PP0C7V4 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FAM90A14PP0C7W9 464 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 GAAP10253 952 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 SAGP10523 405 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 FKBP2P26885 142 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 SOAT1P35610 550 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 RPL3P39023 403 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 LIMS1P48059 325 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 IDH2P48735 452 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 DNAJB13P59910 316 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 UBE2NP61088 152 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 HBA1P69905 142 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ROR2Q01974 943 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 MED22Q15528 200 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 NKPD1Q17RQ9 610 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 LSM12Q3MHD2 195 aaKnown RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 OTUD3Q5T2D3 398 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 KANK2Q63ZY3 851 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM154Q6P9G4 183 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 TRAT1Q6PIZ9 186 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 PAQR6Q6TCH4 344 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 RNF165Q6ZSG1 346 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 LINGO2Q7L985 606 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 AAED1Q7RTV5 226 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 C16orf62Q7Z3J2 963 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ABHD12BQ7Z5M8 362 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 DDIASQ8IXT1 998 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 CLEC4FQ8N1N0 589 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 KRTCAP2Q8N6L1 136 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 POU5F2Q8N7G0 328 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 SMYD1Q8NB12 490 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 IL17RDQ8NFM7 739 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 OR51F2Q8NH61 342 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ACMSDQ8TDX5 336 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 MZB1Q8WU39 189 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 CKAP2Q8WWK9 683 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 BCL2L2Q92843 193 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 MOAP1Q96BY2 351 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 DDIT4LQ96D03 193 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ZG16BQ96DA0 208 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ANKRD27Q96NW4 1050 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 LRRC37BQ96QE4 947 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 NAA11Q9BSU3 229 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 C1orf50Q9BV19 199 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 RACGAP1Q9H0H5 632 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 NELFAQ9H3P2 528 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF696Q9H7X3 374 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ESM1Q9NQ30 184 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ATAD3AQ9NVI7 634 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM45AQ9NWC5 275 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 TREM2Q9NZC2 230 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 ASH2LQ9UBL3 628 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 OSGIN1Q9UJX0 560 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 USP22Q9UPT9 525 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 SLC35A3Q9Y2D2 325 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 TMED7Q9Y3B3 224 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 GRIP1Q9Y3R0 1128 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 DNAJC15Q9Y5T4 150 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 GMEB1Q9Y692 573 aa5.03□□□□□ -1.6
VPS33B-207ENST00000557470 NUP214P35658 2090 aaPredicted RBP5.03□□□□□ -1.6
VPS33B-207ENST00000557470 A0A087WWL8 130 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TRAV34A0A0B4J273 112 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 A0A0G2JK05 382 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 hCG_1809904A0A1W2PP81 198 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 A0A1W2PPE2 198 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 A0A1W2PPM1 405 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 A0A1W2PR64 198 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF503-AS2A6NEH8 195 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 OR6C65A6NJZ3 312 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 AQP7P3A6NL99 342 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 DUXAA6NLW8 204 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM114B3SHH9 223 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF208O43345 1280 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 PEX11AO75192 247 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 UPK3AO75631 287 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 CHEK2O96017 543 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TFP02787 698 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 ABHD2P08910 425 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 IDO1P14902 403 aa5.02□□□□□ -1.61
VPS33B-207ENST00000557470 H2AFXP16104 143 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-207ENST00000557470 TCN1P20061 433 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms