RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CDC42EP2O14613 210 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SEC14L2O76054 403 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 UBL3O95164 117 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 NDUFB2O95178 105 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 FARS2O95363 451 aaKnown RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 IGKV3-15P01624 115 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 ACVR1BP36896 505 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 MAGEA2P43356 314 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 LIMS1P48059 325 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 TUBA1BP68363 451 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 TUBA4AP68366 448 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 BNIP1Q12981 228 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 FHL1Q13642 323 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SEC23BQ15437 767 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 LRFN4Q6PJG9 635 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 TUBA1AQ71U36 451 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 DPPA2Q7Z7J5 298 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 LINC00471Q8N535 108 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SYT14Q8NB59 555 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SMAP2Q8WU79 429 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
SLIRP-209ENST00000557342 CLPTM1LQ96KA5 538 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 KATNB1Q9BVA0 655 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SMURF2Q9HAU4 748 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 GRHPRQ9UBQ7 328 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SIGLEC7Q9Y286 467 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 TEX15Q9BXT5 2789 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 CADP27708 2225 aa10.89□□□□□ -0.67
SLIRP-209ENST00000557342 IGHV1-18A0A0C4DH31 117 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 UNC119BA6NIH7 251 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 AQP12BA6NM10 295 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 ACOT8O14734 319 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 OR10H3O60404 316 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 PTP4A3O75365 173 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 CRYAAP02489 173 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 CD14P08571 375 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 RAP2AP10114 183 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 CD79AP11912 226 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 B4GALT1P15291 398 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 HMGA2P52926 109 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 RUNX1T1Q06455 604 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 CD47Q08722 323 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 THEM4Q5T1C6 240 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 PGM2L1Q6PCE3 622 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 IGFN1Q86VF2 1251 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 AQP12AQ8IXF9 295 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 SLC22A24Q8N4F4 322 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF519Q8TB69 540 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 GNPDA2Q8TDQ7 276 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
SLIRP-209ENST00000557342 NEUROG1Q92886 237 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 RSRC1Q96IZ7 334 aaKnown RBP10.88□□□□□ -0.67
SLIRP-209ENST00000557342 TSPAN32Q96QS1 320 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 RBP7Q96R05 134 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 DHRS9Q9BPW9 319 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 TMEM38BQ9NVV0 291 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 FBXL3Q9UKT7 428 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 MOKQ9UQ07 419 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 LAMP3Q9UQV4 416 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 ATP23Q9Y6H3 246 aa10.88□□□□□ -0.67
SLIRP-209ENST00000557342 LRBAP50851 2863 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 CSMD1Q96PZ7 3565 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 E7EQL1 145 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 TNFRSF11BO00300 401 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 XKRYO14609 159 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 AHCYL1O43865 530 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 RAB36O95755 333 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 CECR9P0C854 216 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 DANCRP0C864 163 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 PAX1P15863 534 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 NPR2P20594 1047 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 FPR3P25089 353 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
SLIRP-209ENST00000557342 RPS6KA3P51812 740 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ERVK-25P63136 954 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 MYBPC1Q00872 1141 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 NAAAQ02083 359 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 AGAP6Q5VW22 663 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 SHEQ5VZ18 495 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 GPR139Q6DWJ6 353 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 C1orf94Q6P1W5 598 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 DPY19L2P2Q6ZN68 376 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 CCDC121Q6ZUS5 278 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 ZER1Q7Z7L7 766 aa10.87□□□□□ -0.67
SLIRP-209ENST00000557342 MDP1Q86V88 176 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms