RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NANSQ9NR45 359 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 RXFP3Q9NSD7 469 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 IL20RAQ9UHF4 553 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 CLEC2DQ9UHP7 191 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 ZNF229Q9UJW7 825 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 OSGIN1Q9UJX0 560 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 PADI1Q9ULC6 663 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 SSR3Q9UNL2 185 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 GPR52Q9Y2T5 361 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 LSM2Q9Y333 95 aaKnown RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 CAB39Q9Y376 341 aaPredicted RBP4.02□□□□□ -1.77
SRP54-212ENST00000556992 PCDHGA3Q9Y5H0 932 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 IER3IP1Q9Y5U9 82 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 BRWD1Q9NSI6 2320 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 NBEAQ8NFP9 2946 aa4.02□□□□□ -1.77
SRP54-212ENST00000556992 LOC400499M0QZD8 3231 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TRAV27A0A087WT01 109 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LOC102723996A0A087X1L8 192 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 IGHV3-20A0A0C4DH32 117 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TRBV11-1A0A0K0K1C0 115 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LOC100506127A0A0U1RQW1 187 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MED19A0JLT2 244 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 DAPL1A0PJW8 107 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 A8MVM7 634 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CLDN25C9JDP6 229 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 BLOC1S5-TXNDC5H3BN57 136 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 J3QRE1 110 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TP53I11O14683 189 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SLC30A4O14863 429 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TRIM3O75382 744 aaPredicted RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 SLC25A12O75746 678 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR6A2O95222 327 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SLC2A10O95528 541 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 PPP1R3DO95685 299 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NUDT14O95848 222 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 TXNDC12O95881 172 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MT-ND5P03915 603 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 HLA-DPB1P04440 258 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CD14P08571 375 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR2T7P0C7T2 308 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LIMS3P0CW19 117 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LIMS4P0CW20 117 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CCL4P13236 92 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF12P17014 697 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GALP22466 123 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 S100A5P33763 92 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 EVI2BP34910 448 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 APOBEC1P41238 236 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 CENPAP49450 140 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 RORCP51449 518 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CCR4P51679 360 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 EFNA3P52797 238 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LIMK1P53667 647 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GAS1P54826 345 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MLLT10P55197 1068 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 FXYD6P3P58550 94 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 RPS7P62081 194 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 NCS1P62166 190 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ACTC1P68032 377 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ACTA1P68133 377 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 BDH1Q02338 343 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF117Q03924 483 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SNTA1Q13424 505 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 AQP6Q13520 282 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 FHL1Q13642 323 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GALEQ14376 348 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 MFSD13AQ14CX5 517 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CD226Q15762 336 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF74Q16587 644 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LPAL2Q16609 132 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NDUFAF6Q330K2 333 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF404Q494X3 552 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 KLHL12Q53G59 568 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 SLC35D3Q5M8T2 416 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LCN1P1Q5VSP4 162 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GPR139Q6DWJ6 353 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NIPAL3Q6P499 406 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 C16orf87Q6PH81 154 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 PAPD4Q6PIY7 484 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 OPN5Q6U736 354 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 CBLN3Q6UW01 205 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 FAM180AQ6UWF9 173 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LANCL3Q6ZV70 420 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 NDUFAF7Q7L592 441 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ASCL5Q7RTU5 278 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GRINAQ7Z429 371 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 KCTD20Q7Z5Y7 419 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LHFPL3Q86UP9 236 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 PHC2Q8IXK0 858 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GPALPP1Q8IXQ4 340 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 DND1Q8IYX4 353 aaKnown RBP4.01□□□□□ -1.77
SRP54-212ENST00000556992 PRR22Q8IZ63 422 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 LRRC17Q8N6Y2 441 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 GATSQ8NAP1 163 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 POMGNT2Q8NAT1 580 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 APCDD1LQ8NCL9 501 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 ZNF248Q8NDW4 579 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR52E2Q8NGJ4 325 aa4.01□□□□□ -1.77
SRP54-212ENST00000556992 OR6Q1Q8NGQ2 317 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms