RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 WDR41Q9HAD4 459 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 ZDHHC18Q9NUE0 388 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 DNAJC11Q9NVH1 559 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 CD274Q9NZQ7 290 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 PHF11Q9UIL8 331 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 ZNF223Q9UK11 482 aaPredicted RBP4.22□□□□□ -1.73
HIF1A-209ENST00000556827 RPH3AQ9Y2J0 694 aaPredicted RBP4.22□□□□□ -1.73
HIF1A-209ENST00000556827 ATG4BQ9Y4P1 393 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 OARD1Q9Y530 152 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 PDZD2O15018 2839 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 BSNQ9UPA5 3926 aa4.22□□□□□ -1.73
HIF1A-209ENST00000556827 PCM1Q15154 2024 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 UQCRHLA0A096LP55 91 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 A0A0G2JMM0 328 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 C2orf92A0A1B0GVN3 265 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 A0A1W2PPB8 328 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 A0A1W2PRS3 328 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 NCF1BA6NI72 391 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 NCF1CA8MVU1 366 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 KIR3DP1A8MWS1 328 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 CCDC188H7C350 402 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 PGRMC1O00264 195 aaKnown RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 STK16O75716 305 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 HSPA4LO95757 839 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 C1QAP02745 245 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 QDPRP09417 244 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 NCF1P14598 390 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ATP5A1P25705 553 aaKnown RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 TSNQ15631 228 aaKnown RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 PDK4Q16654 411 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ZNF791Q3KP31 576 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 FBXL19-AS1Q494R0 122 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ACSF3Q4G176 576 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 CDKL4Q5MAI5 379 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 RTL6Q6ICC9 239 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 FAM166AQ6J272 317 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 SBSNQ6UWP8 590 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ENPP6Q6UWR7 440 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 CNTN4Q8IWV2 1026 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 LRRC25Q8N386 305 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 NAT8LQ8N9F0 302 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ACOT4Q8N9L9 421 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 WFDC11Q8NEX6 87 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 OCC1Q8TAD7 63 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 LINC01560Q8TB33 94 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ZNF519Q8TB69 540 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 RIT1Q92963 219 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 LRRC39Q96DD0 335 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 CMTM7Q96FZ5 175 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 CFAP36Q96G28 342 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 FAM218AQ96MZ4 157 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ZFP3Q96NJ6 502 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 SLC39A3Q9BRY0 314 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 RBM24Q9BX46 236 aaKnown RBP4.21□□□□□ -1.74
HIF1A-209ENST00000556827 SPNS1Q9H2V7 528 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 EGLN3Q9H6Z9 239 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 PFDN4Q9NQP4 134 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 ZNF226Q9NYT6 803 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 SMAD5-AS1Q9Y6J3 95 aa4.21□□□□□ -1.74
HIF1A-209ENST00000556827 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 H7C423 109 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ETHE1O95571 254 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ACTL6AO96019 429 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 HIST1H1TP22492 207 aaPredicted RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ELK3P41970 407 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 MAGEA3P43357 314 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 FNTAP49354 379 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 HNRNPFP52597 415 aaKnown RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 CAPZA1P52907 286 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ATP6V0D1P61421 351 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 CHIT1Q13231 466 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 SLAMF1Q13291 335 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 TNK1Q13470 666 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 DOC2AQ14183 400 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 TGFBIQ15582 683 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 PPP1R3AQ16821 1122 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ADPRMQ3LIE5 342 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 KBTBD12Q3ZCT8 623 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 KHDRBS2Q5VWX1 349 aaKnown RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 MED27Q6P2C8 311 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 TTC27Q6P3X3 843 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 OR4N5Q8IXE1 308 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ST13P4Q8IZP2 240 aaPredicted RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 CCDC63Q8NA47 563 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 BBOF1Q8ND07 529 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 OR10G3Q8NGC4 313 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 OR1J4Q8NGS1 313 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ZPLD1Q8TCW7 415 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 ZNF721Q8TF20 911 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 CDKL2Q92772 493 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 PPWD1Q96BP3 646 aaKnown RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 RILPQ96NA2 401 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 RAB3IPQ96QF0 476 aaPredicted RBP4.2□□□□□ -1.74
HIF1A-209ENST00000556827 MAPKAP1Q9BPZ7 522 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 SFXN3Q9BWM7 321 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 WWTR1Q9GZV5 400 aa4.2□□□□□ -1.74
HIF1A-209ENST00000556827 METTL7AQ9H8H3 244 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms