RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SLC8B1Q6J4K2 584 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CAPN13Q6MZZ7 669 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 TMEM88Q6PEY1 159 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZNF613Q6PF04 617 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 TMPPEQ6ZT21 453 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 DEFB128Q7Z7B8 93 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 NIT1Q86X76 327 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 RIMKLAQ8IXN7 391 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 KLHDC8BQ8IXV7 354 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZNF610Q8N9Z0 462 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SIDT2Q8NBJ9 832 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 OR56A4Q8NGH8 313 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 OR4D5Q8NGN0 318 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 OR10D4PQ8NGN7 298 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 OR5M3Q8NGP4 307 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 OR1S1Q8NH92 325 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SLC7A13Q8TCU3 470 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 BRIX1Q8TDN6 353 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 MZB1Q8WU39 189 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 HIST1H2BAQ96A08 127 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ISOC2Q96AB3 205 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 FAM131CQ96AQ9 280 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 NTNG2Q96CW9 530 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 PHYHIPLQ96FC7 376 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 AURKBQ96GD4 344 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 CENPNQ96H22 339 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 NEDD4LQ96PU5 975 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 NPAS2Q99743 824 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ARHGDIGQ99819 225 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 WDR83Q9BRX9 315 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 TMEM43Q9BTV4 400 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SPATA5L1Q9BVQ7 753 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 MAGT1Q9H0U3 335 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 DPAGT1Q9H3H5 408 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CDC42EP4Q9H3Q1 356 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZMAT4Q9H898 229 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 ZBTB20Q9HC78 741 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 GCM1Q9NP62 436 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SLAMF7Q9NQ25 335 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 NLKQ9UBE8 527 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 CD84Q9UIB8 345 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 HSF4Q9ULV5 492 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 HHLA2Q9UM44 414 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 EXOSC1Q9Y3B2 195 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 TPRKBQ9Y3C4 175 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 LIPGQ9Y5X9 500 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 SPIN1Q9Y657 262 aaPredicted RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 YLPM1P49750 1951 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 CRB1P82279 1406 aa5.63□□□□□ -1.51
TDP1-215ENST00000556498 EDC4Q6P2E9 1401 aaKnown RBP5.63□□□□□ -1.51
TDP1-215ENST00000556498 TRPM3Q9HCF6 1732 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 MYH4Q9Y623 1939 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 MEIKINA0A087WXM9 373 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 hCG_38984A0A1B0GV85 526 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 IGSF23A1L1A6 192 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 C7orf66A4D0T2 115 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TCAF2A6NFQ2 919 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 NPIPB15A6NHN6 443 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 E5RJQ4 531 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 INMT-MINDY4F8WBC2 141 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 H0Y980 276 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 LEFTY2O00292 366 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 AZIN1O14977 448 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SLC16A5O15375 505 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SOX15O60248 233 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CTSVO60911 334 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 STK16O75716 305 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 MMP23AO75900 390 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ANXA9O76027 345 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 HPRT1P00492 218 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CXCL10P02778 98 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 GBAP04062 536 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ADRA2AP08913 450 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CD79AP11912 226 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TDGF1P13385 188 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CREB1P16220 341 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 AMD1P17707 334 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 GPX2P18283 190 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 RAB5AP20339 215 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 FASP25445 335 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 AOAHP28039 575 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 EPHA2P29317 976 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 NTSR1P30989 418 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CRISP1P54107 249 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 UCNP55089 124 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 RAB1AP62820 205 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 RPS27AP62979 156 aaKnown RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 PAX5Q02548 391 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 PAX2Q02962 417 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TLE1Q04724 770 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ABHD18Q0P651 414 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ITPK1Q13572 414 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 HERPUD1Q15011 391 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 PGM5Q15124 567 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ASTE1Q2TB18 679 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 ACSM3Q53FZ2 586 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SLC25A53Q5H9E4 307 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms