RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 FGFBP3Q8TAT2 258 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 SLC26A7Q8TE54 656 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 THOC1Q96FV9 657 aaKnown RBP16.94■□□□□ 0.3
PRKCH-219ENST00000555906 C1orf198Q9H425 327 aa16.94■□□□□ 0.3
PRKCH-219ENST00000555906 TMEFF2Q9UIK5 374 aaPredicted RBP16.94■□□□□ 0.3
PRKCH-219ENST00000555906 ZNF346Q9UL40 294 aaKnown RBP16.94■□□□□ 0.3
PRKCH-219ENST00000555906 A0A1W2PPW3 197 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 SLC22A23A1A5C7 686 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 IGHG1P01857 330 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 HPXP02790 462 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 HIST1H2ABP04908 130 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 PATE4P0C8F1 98 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 UMPSP11172 480 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 PCMT1P22061 227 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 DVL1P1P54792 670 aaPredicted RBP16.93■□□□□ 0.3
PRKCH-219ENST00000555906 MRPS11P82912 194 aaKnown RBP16.93■□□□□ 0.3
PRKCH-219ENST00000555906 CCNIQ14094 377 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 MAD2L1BPQ15013 274 aaPredicted RBP16.93■□□□□ 0.3
PRKCH-219ENST00000555906 VMACQ2NL98 169 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 LRFN4Q6PJG9 635 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 CCDC80Q76M96 950 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 HIST3H2AQ7L7L0 130 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 LRP11Q86VZ4 500 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 RFLNBQ8N5W9 214 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 SLC30A7Q8NEW0 376 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 NOXO1Q8NFA2 376 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 RDH5Q92781 318 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 HIST1H2ACQ93077 130 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 PRSS27Q9BQR3 290 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 NPHS2Q9NP85 383 aa16.93■□□□□ 0.3
PRKCH-219ENST00000555906 CENPBD1B2RD01 187 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 EDF1O60869 148 aaKnown RBP16.92■□□□□ 0.3
PRKCH-219ENST00000555906 SNAP29O95721 258 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 GPR6P46095 362 aaPredicted RBP16.92■□□□□ 0.3
PRKCH-219ENST00000555906 GZMMP51124 257 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 SEC24CP53992 1094 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 SRSF2Q01130 221 aaKnown RBP16.92■□□□□ 0.3
PRKCH-219ENST00000555906 HIST3H3Q16695 136 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 RGS7BPQ6MZT1 257 aaPredicted RBP16.92■□□□□ 0.3
PRKCH-219ENST00000555906 TMEM53Q6P2H8 277 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 HDDC2Q7Z4H3 204 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 SEPHS2Q99611 448 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 SH3GL3Q99963 347 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 MEPEQ9NQ76 525 aaPredicted RBP16.92■□□□□ 0.3
PRKCH-219ENST00000555906 FZR1Q9UM11 496 aa16.92■□□□□ 0.3
PRKCH-219ENST00000555906 B4DSR2 109 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 NCR1O76036 304 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 BCL10O95999 233 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 IGF2P01344 180 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 QDPRP09417 244 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 SAGP10523 405 aaPredicted RBP16.91■□□□□ 0.3
PRKCH-219ENST00000555906 TCN1P20061 433 aaPredicted RBP16.91■□□□□ 0.3
PRKCH-219ENST00000555906 RBM34P42696 430 aaKnown RBP16.91■□□□□ 0.3
PRKCH-219ENST00000555906 CLRN1P58418 232 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 SLC36A2Q495M3 483 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 LIPNQ5VXI9 398 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 METTL21CQ5VZV1 264 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 GLCCI1Q86VQ1 547 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 OR4K5Q8NGD3 323 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 POLR2J2Q9GZM3 115 aaKnown RBP16.91■□□□□ 0.3
PRKCH-219ENST00000555906 RACGAP1Q9H0H5 632 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 POLR2J3Q9H1A7 115 aaKnown RBP16.91■□□□□ 0.3
PRKCH-219ENST00000555906 DUSP13Q9UII6 198 aa16.91■□□□□ 0.3
PRKCH-219ENST00000555906 IGLV3-9A0A075B6K5 115 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 A0A0G2JND7 137 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 A0A1W2PRG6 482 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 MCIDASD6RGH6 385 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 TCF21O43680 179 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 PTHP01270 115 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 TFP02787 698 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 MT-ND1P03886 318 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 NAT2P11245 290 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 SRP14P37108 136 aaKnown RBP16.9■□□□□ 0.3
PRKCH-219ENST00000555906 DAP3P51398 398 aaKnown RBP16.9■□□□□ 0.3
PRKCH-219ENST00000555906 ZNF84P51523 738 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 RPL18Q07020 188 aaKnown RBP16.9■□□□□ 0.3
PRKCH-219ENST00000555906 NKPD1Q17RQ9 610 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 TBC1D28Q2M2D7 210 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 SLC16A14Q7RTX9 510 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 CARM1Q86X55 608 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 PAQR4Q8N4S7 273 aaPredicted RBP16.9■□□□□ 0.3
PRKCH-219ENST00000555906 OR8J3Q8NGG0 315 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 CLDND2Q8NHS1 167 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 ASB10Q8WXI3 467 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 YIPF5Q969M3 257 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 ZNF347Q96SE7 839 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 ZNF416Q9BWM5 594 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 CDH20Q9HBT6 801 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 ZNF275Q9NSD4 429 aaPredicted RBP16.9■□□□□ 0.3
PRKCH-219ENST00000555906 GPR160Q9UJ42 338 aa16.9■□□□□ 0.3
PRKCH-219ENST00000555906 BLOC1S5-TXNDC5H3BN57 136 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 FXYD1O00168 92 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 FBP2O00757 339 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 RP2O75695 350 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 OR5F1O95221 314 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 FAM157BP0CG42 384 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 ZNF250P15622 560 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 ZNF133P52736 654 aaPredicted RBP16.89■□□□□ 0.29
PRKCH-219ENST00000555906 UGT2B15P54855 530 aa16.89■□□□□ 0.29
PRKCH-219ENST00000555906 KLF3P57682 345 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms