RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 BPIFB6Q8NFQ5 453 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 OR8J1Q8NGP2 316 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 SLC24A3Q9HC58 644 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 NRIP3Q9NQ35 241 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PLSCR4Q9NRQ2 329 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 GALNT8Q9NY28 637 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 ELOVL5Q9NYP7 299 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 JKAMPQ9P055 326 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 B3GAT1Q9P2W7 334 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PSORS1C1Q9UIG5 152 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 KIAA1549Q9HCM3 1950 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 SPTAN1Q13813 2472 aaKnown RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 A6NHS1 94 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF726A6NNF4 738 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 C11orf98E9PRG8 122 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TRAF3IP2O43734 574 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 SLC43A1O75387 559 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 NDUFB2O95178 105 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 CGAP01215 116 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 GRK5P34947 590 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 CLDN17P56750 224 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 CDC42P60953 191 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 SLC35A2P78381 396 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 SORDQ00796 357 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 MVKQ03426 396 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 RPL18Q07020 188 aaKnown RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 DBPQ10586 325 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ZP4Q12836 540 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TOP3AQ13472 1001 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 P2RY6Q15077 328 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 CDSNQ15517 529 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 SNAPC1Q16533 368 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ALG10Q5BKT4 473 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 RPL13AP3Q6NVV1 102 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 NIPAL3Q6P499 406 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 Q6ZT83 130 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 FAM122BQ7Z309 247 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 KDM8Q8N371 416 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF610Q8N9Z0 462 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 POMGNT2Q8NAT1 580 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TSPAN14Q8NG11 270 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 OR2T33Q8NG76 320 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TEX47Q8TBZ9 253 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM163Q8TC26 289 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 FANK1Q8TC84 345 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ADAD1Q96M93 576 aaKnown RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF385AQ96PM9 386 aaKnown RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 GPX7Q96SL4 187 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-218ENST00000555213 SLCO5A1Q9H2Y9 848 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 AMBNQ9NP70 447 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 INIPQ9NRY2 104 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 TBC1D23Q9NUY8 699 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 ERVK-18Q9QC07 812 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 UPB1Q9UBR1 384 aa9.65□□□□□ -0.86
SHMT2-218ENST00000555213 PCNX1Q96RV3 2341 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 IMPA2O14732 288 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 ARPC3O15145 178 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 MPZL2O60487 215 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 PPP1R3DO95685 299 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 TXNDC12O95881 172 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 HMGN1P05114 100 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 NR2C1P13056 603 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 RPL4P36578 427 aaKnown RBP9.64□□□□□ -0.87
SHMT2-218ENST00000555213 CD79BP40259 229 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 CSNK2BP67870 215 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 SLC35F1Q5T1Q4 408 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 FBXW9Q5XUX1 488 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 FAM205BPQ63HN1 556 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 DPY19L2P2Q6ZN68 376 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 SLC35D2Q76EJ3 337 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 IGFN1Q86VF2 1251 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 WDFY1Q8IWB7 410 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 ZIC4Q8N9L1 334 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF582Q96NG8 517 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-218ENST00000555213 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 IFT27Q9BW83 186 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 HCAR1Q9BXC0 346 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 B3GAT2Q9NPZ5 323 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 HINT3Q9NQE9 182 aaKnown RBP9.64□□□□□ -0.87
SHMT2-218ENST00000555213 MRPS18AQ9NVS2 196 aaKnown RBP9.64□□□□□ -0.87
SHMT2-218ENST00000555213 ASB6Q9NWX5 421 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 MALT1Q9UDY8 824 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 GPR52Q9Y2T5 361 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 ADAM18Q9Y3Q7 739 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 IER3IP1Q9Y5U9 82 aa9.64□□□□□ -0.87
SHMT2-218ENST00000555213 SPTBN1Q01082 2364 aaKnown RBP9.64□□□□□ -0.87
SHMT2-218ENST00000555213 SH3D21A4FU49 640 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 NPIPB13A6NJU9 1138 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 NPIPB4C9JG80 1138 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF587BE7ETH6 402 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 PTGES3LE9PB15 166 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 C16orf97H3BN30 126 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 CLDN1O95832 211 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 BCL10O95999 233 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 IGHV3-9P01782 118 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 IGHG1P01857 330 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 COX6B1P14854 86 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 IFNGR1P15260 489 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 PCMT1P22061 227 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms