RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TMEM38BQ9NVV0 291 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 DUSP13Q9UII6 198 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 GPR160Q9UJ42 338 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 ZNF346Q9UL40 294 aaKnown RBP16.13■□□□□ 0.17
CPSF2-203ENST00000554290 BLOC1S5-TXNDC5H3BN57 136 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 PTHP01270 115 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 IGHG1P01857 330 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 QDPRP09417 244 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 ASAH2BP0C7U1 165 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 SRP14P37108 136 aaKnown RBP16.12■□□□□ 0.17
CPSF2-203ENST00000554290 ALDH3B1P43353 468 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 SEC24CP53992 1094 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 CYLC2Q14093 348 aaPredicted RBP16.12■□□□□ 0.17
CPSF2-203ENST00000554290 MELKQ14680 651 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 TRIP10Q15642 601 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 VMACQ2NL98 169 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 LRP11Q86VZ4 500 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 SLC30A7Q8NEW0 376 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 C1orf159Q96HA4 380 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 SH3GL1Q99961 368 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 SH3GL3Q99963 347 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 C1orf198Q9H425 327 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 NPHS2Q9NP85 383 aa16.12■□□□□ 0.17
CPSF2-203ENST00000554290 A0A0G2JND7 137 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 A0A1W2PPW3 197 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 A0A1W2PRG6 482 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 B4DSR2 109 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 PGA4P0DJD7 388 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 PGA3P0DJD8 388 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 ACHEP22303 614 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 GPR6P46095 362 aaPredicted RBP16.11■□□□□ 0.17
CPSF2-203ENST00000554290 ZNF84P51523 738 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 DVL1P1P54792 670 aaPredicted RBP16.11■□□□□ 0.17
CPSF2-203ENST00000554290 CLRN1P58418 232 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 MAD2L1BPQ15013 274 aaPredicted RBP16.11■□□□□ 0.17
CPSF2-203ENST00000554290 SLC36A2Q495M3 483 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 ELFN2Q5R3F8 820 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 RGS7BPQ6MZT1 257 aaPredicted RBP16.11■□□□□ 0.17
CPSF2-203ENST00000554290 CCDC80Q76M96 950 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 HDDC2Q7Z4H3 204 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 ZNF584Q8IVC4 421 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 RFLNBQ8N5W9 214 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 FGFBP3Q8TAT2 258 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 CDH20Q9HBT6 801 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 MYEF2Q9P2K5 600 aaKnown RBP16.11■□□□□ 0.17
CPSF2-203ENST00000554290 FZR1Q9UM11 496 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 SH3GLB1Q9Y371 365 aa16.11■□□□□ 0.17
CPSF2-203ENST00000554290 MCIDASD6RGH6 385 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 MGRN1O60291 552 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 EDF1O60869 148 aaKnown RBP16.1■□□□□ 0.17
CPSF2-203ENST00000554290 HPXP02790 462 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 MT-ND1P03886 318 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 COL8A2P25067 703 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 TMEM33P57088 247 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 MRPS11P82912 194 aaKnown RBP16.1■□□□□ 0.17
CPSF2-203ENST00000554290 PLP2Q04941 152 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 CCNIQ14094 377 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 NKPD1Q17RQ9 610 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 NRN1LQ496H8 165 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 NANOGP8Q6NSW7 305 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 SLC16A14Q7RTX9 510 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 HDXQ7Z353 690 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 TSPYL5Q86VY4 417 aaPredicted RBP16.1■□□□□ 0.17
CPSF2-203ENST00000554290 OR4K5Q8NGD3 323 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 OR1J2Q8NGS2 313 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 ECSITQ9BQ95 431 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 PRSS27Q9BQR3 290 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 LRMDAQ9H2I8 198 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 NANOGQ9H9S0 305 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 MEPEQ9NQ76 525 aaPredicted RBP16.1■□□□□ 0.17
CPSF2-203ENST00000554290 BAG5Q9UL15 447 aa16.1■□□□□ 0.17
CPSF2-203ENST00000554290 IQCMA0A1B0GVH7 501 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 CENPBD1B2RD01 187 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 RBM34P42696 430 aaKnown RBP16.09■□□□□ 0.17
CPSF2-203ENST00000554290 GZMMP51124 257 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 SRSF2Q01130 221 aaKnown RBP16.09■□□□□ 0.17
CPSF2-203ENST00000554290 HIST3H3Q16695 136 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 TBC1D28Q2M2D7 210 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 GLCCI1Q86VQ1 547 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 CARM1Q86X55 608 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 C11orf40Q8WZ69 217 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 MCHR2Q969V1 340 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 ZNF416Q9BWM5 594 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 POLR2J2Q9GZM3 115 aaKnown RBP16.09■□□□□ 0.17
CPSF2-203ENST00000554290 POLR2J3Q9H1A7 115 aaKnown RBP16.09■□□□□ 0.17
CPSF2-203ENST00000554290 MRGBPQ9NV56 204 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.09■□□□□ 0.17
CPSF2-203ENST00000554290 CUBNO60494 3623 aa16.09■□□□□ 0.17
CPSF2-203ENST00000554290 TCF21O43680 179 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 IFNA14P01570 189 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 F13BP05160 661 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 FAM157BP0CG42 384 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 SAGP10523 405 aaPredicted RBP16.08■□□□□ 0.16
CPSF2-203ENST00000554290 NAT2P11245 290 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 FUT1P19526 365 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 RAD52P43351 418 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 DAP3P51398 398 aaKnown RBP16.08■□□□□ 0.16
CPSF2-203ENST00000554290 CRYBA2P53672 197 aa16.08■□□□□ 0.16
CPSF2-203ENST00000554290 KLF3P57682 345 aaPredicted RBP16.08■□□□□ 0.16
CPSF2-203ENST00000554290 TAS2R41P59536 307 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms