RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TPGS2Q68CL5 300 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CYB5R2Q6BCY4 276 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 OR4F3Q6IEY1 312 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FAM71F2Q6NXP2 309 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 NRMQ8IXM6 262 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF100Q8IYN0 542 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 DCAF4L2Q8NA75 395 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FAM83FQ8NEG4 500 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 OR2T33Q8NG76 320 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 OR8J1Q8NGP2 316 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 OR1F12Q8NHA8 337 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 KIR2DL5BQ8NHK3 375 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 NANPQ8TBE9 248 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 M1APQ8TC57 530 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FAM3CQ92520 227 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RAPGEF5Q92565 580 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CXorf40BQ96DE9 158 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 COQ2Q96H96 371 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TGS1Q96RS0 853 aaKnown RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RIOK1Q9BRS2 568 aaKnown RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RTBDNQ9BSG5 229 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TMEM121Q9BTD3 319 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RAB34Q9BZG1 259 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ROPN1BQ9BZX4 212 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 MAGT1Q9H0U3 335 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 LRRN3Q9H3W5 708 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 GLIPR2Q9H4G4 154 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 MCCC2Q9HCC0 563 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 MARCH5Q9NX47 278 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ADAM28Q9UKQ2 775 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 IFT52Q9Y366 437 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FRMPD4Q14CM0 1322 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FRYLO94915 3013 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CFAP47Q6ZTR5 3102 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TECTAO75443 2155 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 A0A1W2PQ67 120 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 LRP5LA4QPB2 252 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 OR52A4PA6NMU1 304 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 SNTNA6NMZ2 147 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 E9PLD3 99 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 H3BMQ9 156 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 DYNC1I1O14576 645 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 ATP5LO75964 103 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 AP2A1O95782 977 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 F10P00742 488 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 IGF1P05019 195 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 XRCC1P18887 633 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 TPSB2P20231 275 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 GALP22466 123 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CHMLP26374 656 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 FGF9P31371 208 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CASP14P31944 242 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CDH5P33151 784 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 TAGLN2P37802 199 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PEX19P40855 299 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 NBL1P41271 181 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 SYKP43405 635 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 ATP5OP48047 213 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 EFNB2P52799 333 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PRRX1P54821 245 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PKNOX1P55347 436 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 RPL8P62917 257 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 TPSAB1Q15661 275 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PRAMEF20Q5VT98 475 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 OR2A2Q6IF42 318 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CCDC137Q6PK04 289 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 METAP1DQ6UB28 335 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 KDM7AQ6ZMT4 941 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CCDC73Q6ZRK6 1079 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CYS1Q717R9 158 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 ALLCQ8N6M5 410 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 FAM184AQ8NB25 1140 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 OR51G2Q8NGK0 314 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 KCNG3Q8TAE7 436 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 FAM81AQ8TBF8 368 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 SLC22A8Q8TCC7 542 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PIGCQ92535 297 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 NT5C3BQ969T7 300 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 MCUR1Q96AQ8 359 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PELI1Q96FA3 418 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 DYNLL2Q96FJ2 89 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 TIMD4Q96H15 378 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 TMEM80Q96HE8 168 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CENPKQ9BS16 269 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 CHRDL1Q9BU40 450 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 NUP58Q9BVL2 599 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 IQCGQ9H095 443 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 NAT10Q9H0A0 1025 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PPDPFQ9H3Y8 114 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 VCPKMTQ9H867 229 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 RAB18Q9NP72 206 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PNO1Q9NRX1 252 aaKnown RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 NUDT15Q9NV35 164 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 KLHL28Q9NXS3 571 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 IL36GQ9NZH8 169 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PSMC3IPQ9P2W1 217 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-210ENST00000553693 PLLPQ9Y342 182 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 KMT2EQ8IZD2 1858 aa2.34□□□□□ -2.03
SCFD1-210ENST00000553693 BRWD1Q9NSI6 2320 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms