RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ZNF35P13682 527 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 TCN1P20061 433 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-206ENST00000553529 SNRPD2P62316 118 aaKnown RBP15.72■□□□□ 0.11
SHMT2-206ENST00000553529 RAB1AP62820 205 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 HNRNPA0Q13151 305 aaKnown RBP15.72■□□□□ 0.11
SHMT2-206ENST00000553529 DAG1Q14118 895 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 ALKBH6Q3KRA9 238 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 HIST3H2AQ7L7L0 130 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 LRRC18Q8N456 261 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 FAM169BQ8N8A8 192 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 NOXO1Q8NFA2 376 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 NUP37Q8NFH4 326 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 OR13C2Q8NGS9 318 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 HIST1H2ACQ93077 130 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 SLC25A44Q96H78 314 aaPredicted RBP15.72■□□□□ 0.11
SHMT2-206ENST00000553529 DOK1Q99704 481 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 SOX7Q9BT81 388 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 MRPL13Q9BYD1 178 aaKnown RBP15.72■□□□□ 0.11
SHMT2-206ENST00000553529 SLC19A3Q9BZV2 496 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 B3GAT2Q9NPZ5 323 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 V9GYQ6 96 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 H7C1C5 153 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 DIRAS1O95057 198 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 PRSS23O95084 383 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 F12P00748 615 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 TSPAN19P0C672 248 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 HOXB1P14653 301 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF16P17020 682 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF26P17031 533 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 MSX2P35548 267 aaPredicted RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 GPR4P46093 362 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 CLRN1P58418 232 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 LCN6P62502 163 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 CHRNB3Q05901 458 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 TMEM249Q2WGJ8 235 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 C3orf36Q3SXR2 165 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 ARMC4Q5T2S8 1044 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 NRMQ8IXM6 262 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 LRRC75AQ8NAA5 344 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 OR51A7Q8NH64 312 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 NSMAFQ92636 917 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 NMD3Q96D46 503 aaKnown RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 FOXN4Q96NZ1 517 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 TSPAN32Q96QS1 320 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 MDFIQ99750 246 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 INIPQ9NRY2 104 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 MED31Q9Y3C7 131 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 UGT2A1Q9Y4X1 527 aa15.71■□□□□ 0.11
SHMT2-206ENST00000553529 CHD3Q12873 2000 aaKnown RBP15.71■□□□□ 0.11
SHMT2-206ENST00000553529 IGHV4-61A0A0C4DH41 118 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 VWC2LB2RUY7 222 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 CDC42EP2O14613 210 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 IMPA2O14732 288 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 SLC22A2O15244 555 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 CD5LO43866 347 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 FAM157BP0CG42 384 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 NPR2P20594 1047 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 NR4A1P22736 598 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 RBMXP38159 391 aaKnown RBP15.7■□□□□ 0.1
SHMT2-206ENST00000553529 RBM34P42696 430 aaKnown RBP15.7■□□□□ 0.1
SHMT2-206ENST00000553529 ALDH3B1P43353 468 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 PSME3P61289 254 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 PPP2R2BQ00005 443 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 GGTLC2Q14390 218 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 EFNB3Q15768 340 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 HIST3H3Q16695 136 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 CBLL1Q75N03 491 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 ARIH2OSQ8N7S6 290 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 GTF3AQ92664 365 aaKnown RBP15.7■□□□□ 0.1
SHMT2-206ENST00000553529 PMF1-BGLAPU3KQ54 211 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 DNHD1Q96M86 4753 aa15.7■□□□□ 0.1
SHMT2-206ENST00000553529 ABCA1O95477 2261 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 A0A087WUU8 490 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 B9A039 149 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 MCIDASD6RGH6 385 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 GSTA4O15217 222 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 CCDC22O60826 627 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 IGHG1P01857 330 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 SCG5P05408 212 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 ADRA2AP08913 450 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 IGHV4-31P0DP07 118 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 ACADSP16219 412 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 IL2RGP31785 369 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 TMEM255AQ5JRV8 349 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 IL17RELQ6ZVW7 336 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 OR4F15Q8NGB8 312 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 BPIFA2Q96DR5 249 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 TNFRSF13CQ96RJ3 184 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 SEPHS2Q99611 448 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 ZNF442Q9H7R0 627 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 ABCD2Q9UBJ2 740 aa15.69■□□□□ 0.1
SHMT2-206ENST00000553529 ZNF346Q9UL40 294 aaKnown RBP15.69■□□□□ 0.1
SHMT2-206ENST00000553529 A0A1W2PRG6 482 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 LRP5LA4QPB2 252 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 SNX3O60493 162 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 CRLF1O75462 422 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 RAB36O95755 333 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 CLPTM1O96005 669 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 IFNA14P01570 189 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 LSP1P33241 339 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms