RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GTPBP8Q8N3Z3 284 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TMEM156Q8N614 296 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 THAP3Q8WTV1 239 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 GHSRQ92847 366 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TCEAL3Q969E4 200 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF524Q96C55 264 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PELI1Q96FA3 418 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TMEM41AQ96HV5 264 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PGLYRP3Q96LB9 341 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ADAD1Q96M93 576 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 INTS14Q96SY0 518 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TBX5Q99593 518 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 EDEM2Q9BV94 578 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 HDHD5Q9BXW7 423 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 BARHL1Q9BZE3 327 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ZCCHC4Q9H5U6 513 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CCDC86Q9H6F5 360 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RNF167Q9H6Y7 350 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 SH2D2AQ9NP31 389 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 HPF1Q9NWY4 346 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 MED11Q9P086 117 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PLEKHB1Q9UF11 243 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 DAPK2Q9UIK4 370 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 KCNG2Q9UJ96 466 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 LAMP5Q9UJQ1 280 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 FBXL4Q9UKA2 621 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 B9D1Q9UPM9 204 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 MRPS18CQ9Y3D5 142 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 COL5A1P20908 1838 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PCDH15Q96QU1 1955 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 MDC1Q14676 2089 aaKnown RBP6.56□□□□□ -1.36
ATXN3-221ENST00000553498 MYO10Q9HD67 2058 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 TRBV2A0A0J9YWF9 115 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SLC22A23A1A5C7 686 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 NPIPA5E9PKD4 350 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PDCD5O14737 125 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SELENOFO60613 162 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PFDN1O60925 122 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 AQP8O94778 261 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 TPPPO94811 219 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PMS2P2O95744 297 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 MT-CO3P00414 261 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 UCHL1P09936 223 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 TCN2P20062 427 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ALOX5APP20292 161 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 CD79BP40259 229 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 NAA10P41227 235 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-221ENST00000553498 RANBP1P43487 201 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 GDI2P50395 445 aaKnown RBP6.56□□□□□ -1.36
ATXN3-221ENST00000553498 CCR9P51686 369 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SCAND1P57086 179 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SLC35A1P78382 337 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 CSRP2Q16527 193 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PCK2Q16822 640 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ACSM3Q53FZ2 586 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ZMAT1Q5H9K5 638 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 THEM4Q5T1C6 240 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SLC18B1Q6NT16 456 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 POMZP3Q6PJE2 187 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 UNQ9370/PRO34162Q6UXP9 181 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 B3GLCTQ6Y288 498 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 C16orf47Q6ZP98 133 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-221ENST00000553498 RHOUQ7L0Q8 258 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PPP1R32Q7Z5V6 425 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 CEACAM19Q7Z692 300 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 LYSMD2Q8IV50 215 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 WDSUB1Q8N9V3 476 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SYT14Q8NB59 555 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 OTOSQ8NHW6 89 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 CT55Q8WUE5 264 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ASB10Q8WXI3 467 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 MIB2Q96AX9 1013 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 C5orf34Q96MH7 638 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 RBP7Q96R05 134 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 PRRX2Q99811 253 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 KCNS3Q9BQ31 491 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SLITRK2Q9H156 845 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SYT4Q9H2B2 425 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 TPK1Q9H3S4 243 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 SMOC1Q9H4F8 434 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 AKIRIN1Q9H9L7 192 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF160Q9HCG1 818 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 GALNT9Q9HCQ5 603 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ZFP64Q9NPA5 681 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ABRACLQ9P1F3 81 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 KLHL9Q9P2J3 617 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 TEKT2Q9UIF3 430 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 GNG8Q9UK08 70 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 NPIPA1Q9UND3 350 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 RASD1Q9Y272 281 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF281Q9Y2X9 895 aa6.56□□□□□ -1.36
ATXN3-221ENST00000553498 MYO9BQ13459 2157 aa6.55□□□□□ -1.36
ATXN3-221ENST00000553498 TNRC6BQ9UPQ9 1833 aaKnown RBP6.55□□□□□ -1.36
ATXN3-221ENST00000553498 IGLV1-36A0A0B4J1U3 117 aa6.55□□□□□ -1.36
ATXN3-221ENST00000553498 FABP12A6NFH5 140 aa6.55□□□□□ -1.36
ATXN3-221ENST00000553498 CD8B2A6NJW9 211 aa6.55□□□□□ -1.36
ATXN3-221ENST00000553498 TMEM212A6NML5 194 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms