RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 DMAP1Q9NPF5 467 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CTPS2Q9NRF8 586 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 RAB20Q9NX57 234 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 DEC1Q9P2X7 70 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 NUFIP1Q9UHK0 495 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 ARHGAP21Q5T5U3 1957 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 COL16A1Q07092 1604 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CEMIPQ8WUJ3 1361 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 MTCL1Q9Y4B5 1905 aaKnown RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 SUPT3HO75486 399 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 EEDO75530 441 aaKnown RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 OR2J3O76001 311 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 IGLV2-23P01705 113 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 PCCAP05165 728 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ANXA5P08758 320 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 PSG2P11465 335 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF30P17039 623 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CNR1P21554 472 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 AQP2P41181 271 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 TNNT2P45379 298 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CDKN1BP46527 198 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CSNK1DP48730 415 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 TMED10P49755 219 aaKnown RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 SSR4P51571 173 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 PRRX1P54821 245 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 YWHAGP61981 247 aaKnown RBP eCLIP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 GBE1Q04446 702 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 RCN1Q15293 331 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CHRNA6Q15825 494 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 RSPO1Q2MKA7 263 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF658BQ4V348 819 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 TMEM255AQ5JRV8 349 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CYB5R2Q6BCY4 276 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 EID2Q8N6I1 236 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 OR51G1Q8NGK1 321 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 RHEBL1Q8TAI7 183 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 SLC38A4Q969I6 547 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 DUS3LQ96G46 650 aaKnown RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF578Q96N58 590 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-210ENST00000553455 SLC29A1Q99808 456 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ECSITQ9BQ95 431 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 OSBPL10Q9BXB5 764 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 NEK6Q9HC98 313 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF226Q9NYT6 803 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 VANGL2Q9ULK5 521 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
SYNE2-210ENST00000553455 TRBV11-1A0A0K0K1C0 115 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 NKX2-6A6NCS4 301 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 H3BNH8 94 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 DYNC1I1O14576 645 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 UTS2O95399 124 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 C6orf47O95873 294 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 FTH1P02794 183 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 MGMTP16455 207 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 SERPINB5P36952 375 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 NAA10P41227 235 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-210ENST00000553455 NMUP48645 174 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ACTA2P62736 377 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ACTG2P63267 376 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ACTC1P68032 377 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ACTA1P68133 377 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 PAX5Q02548 391 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ZBED5Q49AG3 693 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ANKRD26P1Q6NSI1 321 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 LYPD2Q6UXB3 125 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 CCDC73Q6ZRK6 1079 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 SLC34A3Q8N130 599 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 MDS2Q8NDY4 140 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 OR10R2Q8NGX6 335 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 GEMIN6Q8WXD5 167 aaKnown RBP3.35□□□□□ -1.87
SYNE2-210ENST00000553455 DNAJC19Q96DA6 116 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ASB9Q96DX5 294 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 CCDC126Q96EE4 140 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 SH3GL3Q99963 347 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF160Q9HCG1 818 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 PITPNC1Q9UKF7 332 aa3.35□□□□□ -1.87
SYNE2-210ENST00000553455 A0A075B6Q4 140 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 TRBV6-6A0A0A6YYG2 114 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 A0A0B4J2A0 478 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SMCO3A2RU48 225 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 F6UB75 175 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SPECC1L-ADORA2AF8WAN1 911 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CDC7O00311 574 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 EIF3HO15372 352 aaKnown RBP eCLIP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CHST1O43916 411 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SS18L1O75177 396 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 CLIC3O95833 236 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 BGLAPP02818 100 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SMIM10L1P0DMW3 83 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF24P17028 368 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 OTX1P32242 354 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
SYNE2-210ENST00000553455 SPECC1LQ69YQ0 1117 aa3.34□□□□□ -1.87
SYNE2-210ENST00000553455 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms