RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 GSK3BP49841 420 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 MYBPC1Q00872 1141 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 RUNX1T1Q06455 604 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 RPL18Q07020 188 aaKnown RBP13.73□□□□□ -0.21
CDK4-215ENST00000553237 GGTLC2Q14390 218 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 RAB39AQ14964 217 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 PIWIL3Q7Z3Z3 882 aaKnown RBP13.73□□□□□ -0.21
CDK4-215ENST00000553237 SLC22A24Q8N4F4 322 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 SH3GL3Q99963 347 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 ARL8BQ9NVJ2 186 aa13.73□□□□□ -0.21
CDK4-215ENST00000553237 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 MCIDASD6RGH6 385 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 CXCR6O00574 342 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 GSTA4O15217 222 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 DHHO43323 396 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 UBL3O95164 117 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 FAM107AO95990 144 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 IGHG1P01857 330 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 PGA4P0DJD7 388 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 PGA3P0DJD8 388 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 ZNF35P13682 527 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 YAP1P46937 504 aaKnown RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 PPOXP50336 477 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 CLRN1P58418 232 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 VLDLRP98155 873 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 LAPTM4AQ15012 233 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 MSMPQ1L6U9 139 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 GKAP1Q5VSY0 366 aaPredicted RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 CDK20Q8IZL9 346 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 MOSPD2Q8NHP6 518 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 ZNF347Q96SE7 839 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 KCTD14Q9BQ13 255 aaPredicted RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 PIMREGQ9BSJ6 248 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 POLR2J2Q9GZM3 115 aaKnown RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 RAB1BQ9H0U4 201 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 POLR2J3Q9H1A7 115 aaKnown RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 DYNLRB1Q9NP97 96 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 SPAG4Q9NPE6 437 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 TMEM38BQ9NVV0 291 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 ADA2Q9NZK5 511 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 ABCD2Q9UBJ2 740 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 TAGLN3Q9UI15 199 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 MED31Q9Y3C7 131 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
CDK4-215ENST00000553237 ANK3Q12955 4377 aaKnown RBP13.72□□□□□ -0.21
CDK4-215ENST00000553237 VWC2LB2RUY7 222 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 PIP5K1CO60331 668 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 OR8G3PP0DMU2 310 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 FUT4P22083 530 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 NR4A2P43354 598 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 SELENOWP63302 87 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDK4-215ENST00000553237 C6orf52Q5T4I8 152 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 VTCN1Q7Z7D3 282 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 MEX3DQ86XN8 651 aaKnown RBP13.71□□□□□ -0.21
CDK4-215ENST00000553237 HIPK1Q86Z02 1210 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 OR4K5Q8NGD3 323 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 ASB10Q8WXI3 467 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 MCHR2Q969V1 340 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 MDFIQ99750 246 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 MRPL37Q9BZE1 423 aaKnown RBP13.71□□□□□ -0.21
CDK4-215ENST00000553237 INIPQ9NRY2 104 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 RHCGQ9UBD6 479 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 A4GNTQ9UNA3 340 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 SNX13Q9Y5W8 968 aa13.71□□□□□ -0.21
CDK4-215ENST00000553237 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.22
CDK4-215ENST00000553237 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 TRMUO75648 421 aaKnown RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 IGFBP1P08833 259 aaPredicted RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 ADRA2AP08913 450 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 THRBP10828 461 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 ACADSP16219 412 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 NCK1P16333 377 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 GALK2Q01415 458 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 ST3GAL3Q11203 375 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 IQCCQ4KMZ1 466 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 ZNF584Q8IVC4 421 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 FITM2Q8N6M3 262 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 LZICQ8WZA0 190 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 PRRC1Q96M27 445 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 KCNK17Q96T54 332 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 SYT3Q9BQG1 590 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 MRPL13Q9BYD1 178 aaKnown RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 TPK1Q9H3S4 243 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 RNF121Q9H920 327 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 FBXO9Q9UK97 447 aaPredicted RBP13.7□□□□□ -0.22
CDK4-215ENST00000553237 FZR1Q9UM11 496 aa13.7□□□□□ -0.22
CDK4-215ENST00000553237 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
CDK4-215ENST00000553237 J3KTA2 159 aa13.69□□□□□ -0.22
CDK4-215ENST00000553237 NDUFS8O00217 210 aa13.69□□□□□ -0.22
CDK4-215ENST00000553237 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
CDK4-215ENST00000553237 STAMBPO95630 424 aa13.69□□□□□ -0.22
CDK4-215ENST00000553237 ZNF682O95780 498 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms