RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
VPS29-211ENST00000553128 TCF7L2Q9NQB0 619 aa10.86□□□□□ -0.67
VPS29-211ENST00000553128 KLHL14Q9P2G3 628 aa10.86□□□□□ -0.67
VPS29-211ENST00000553128 FBXL3Q9UKT7 428 aa10.86□□□□□ -0.67
VPS29-211ENST00000553128 CCDC154A6NI56 674 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 SMIM23A6NLE4 172 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 A8MXK9 166 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 SRRM5B3KS81 715 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 LRRN3E7EW58 273 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 F5H0A9 414 aaPredicted RBP10.85□□□□□ -0.67
VPS29-211ENST00000553128 PIN1P1O15428 100 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 MFN2O95140 757 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 NDUFA7O95182 113 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 NQO1P15559 274 aaKnown RBP10.85□□□□□ -0.67
VPS29-211ENST00000553128 DRD4P21917 467 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 MVDP53602 400 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 PAX2Q02962 417 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 MAD2L1Q13257 205 aaPredicted RBP10.85□□□□□ -0.67
VPS29-211ENST00000553128 C6orf89Q6UWU4 347 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 PIWIL3Q7Z3Z3 882 aaKnown RBP10.85□□□□□ -0.67
VPS29-211ENST00000553128 ADPRHL1Q8NDY3 354 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 VPS37AQ8NEZ2 397 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 OR1J1Q8NGS3 322 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 TESCQ96BS2 214 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 SLC41A3Q96GZ6 507 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 MOGAT1Q96PD6 335 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 TXLNGYQ9BZA5 131 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 SLC6A13Q9NSD5 602 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 SLC17A7Q9P2U7 560 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 DNAH9Q9NYC9 4486 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 TANC2Q9HCD6 1990 aa10.85□□□□□ -0.67
VPS29-211ENST00000553128 TRAV36DV7A0A075B6V5 113 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 ZNF726A6NNF4 738 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 OR2T1O43869 369 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 SNAP29O95721 258 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 BGLAPP02818 100 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 MT-ND5P03915 603 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 BCHEP06276 602 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 ETFAP13804 333 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 HTR2AP28223 471 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 CSNK1A1P48729 337 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 NME5P56597 212 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 SLC3A1Q07837 685 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 HLXQ14774 488 aaPredicted RBP10.84□□□□□ -0.67
VPS29-211ENST00000553128 ZMYND11Q15326 602 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 THEM4Q5T1C6 240 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 LRFN4Q6PJG9 635 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 ZNF621Q6ZSS3 439 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 COMTD1Q86VU5 262 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 ZNF101Q8IZC7 436 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 OR10S1Q8NGN2 331 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 SLC38A5Q8WUX1 472 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 SLC38A4Q969I6 547 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 TMEM54Q969K7 222 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 UPRTQ96BW1 309 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 SPATA9Q9BWV2 254 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 BCL2L14Q9BZR8 327 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 PRDM13Q9H4Q3 707 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 BTNL2Q9UIR0 455 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 PRDM4Q9UKN5 801 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 RNF114Q9Y508 228 aa10.84□□□□□ -0.67
VPS29-211ENST00000553128 A0A1B0GWA3 101 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 CRYBA1P05813 215 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 VSIG8P0DPA2 414 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 IL12AP29459 219 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 WNT5AP41221 380 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 BIDP55957 195 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 PUDPQ08623 228 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 TBC1D28Q2M2D7 210 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 LRRC28Q86X40 367 aaPredicted RBP10.83□□□□□ -0.68
VPS29-211ENST00000553128 KLHL36Q8N4N3 616 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 POU5F2Q8N7G0 328 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 CPEB3Q8NE35 698 aaKnown RBP10.83□□□□□ -0.68
VPS29-211ENST00000553128 OR4K5Q8NGD3 323 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 EPS8L3Q8TE67 593 aaKnown RBP10.83□□□□□ -0.68
VPS29-211ENST00000553128 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 MARS2Q96GW9 593 aaKnown RBP10.83□□□□□ -0.68
VPS29-211ENST00000553128 PANX1Q96RD7 426 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 RNF121Q9H920 327 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 MSL2Q9HCI7 577 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 TMEM106BQ9NUM4 274 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 GLTPQ9NZD2 209 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 P2RX2Q9UBL9 471 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 TRIM33Q9UPN9 1127 aa10.83□□□□□ -0.68
VPS29-211ENST00000553128 E9PBE3 544 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 H0YL77 283 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 CLPXO76031 633 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 ADH4P08319 380 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 THRBP10828 461 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 CCNOP22674 350 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 AHCYP23526 432 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 S100A3P33764 101 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 PROK1P58294 105 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 LARS2Q15031 903 aaKnown RBP10.82□□□□□ -0.68
VPS29-211ENST00000553128 MOGQ16653 247 aa10.82□□□□□ -0.68
VPS29-211ENST00000553128 TMEM155Q4W5P6 130 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms