RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 RFC3P40938 356 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 CRYBB2P43320 205 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 MAGEA5P43359 124 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 CD97P48960 835 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 TNFSF10P50591 281 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 HCCSP53701 268 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 CLDN20P56880 219 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 CARD18P57730 90 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 GPR50Q13585 617 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 VASH1Q7L8A9 365 aaPredicted RBP11.33□□□□□ -0.6
CACNB3-223ENST00000552480 SLC22A16Q86VW1 577 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 EGFL6Q8IUX8 553 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 WDFY1Q8IWB7 410 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 RFLNBQ8N5W9 214 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 NOXO1Q8NFA2 376 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 KBTBD8Q8NFY9 601 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
CACNB3-223ENST00000552480 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 SCNM1Q9BWG6 230 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 MRPL13Q9BYD1 178 aaKnown RBP11.33□□□□□ -0.6
CACNB3-223ENST00000552480 WDR76Q9H967 626 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 ZMIZ1Q9ULJ6 1067 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 WASF3Q9UPY6 502 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 KCNMB2Q9Y691 235 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 KNTC1P50748 2209 aa11.33□□□□□ -0.6
CACNB3-223ENST00000552480 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 CENPBD1B2RD01 187 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 NPIPA2E9PIF3 369 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 NPIPA3F8WFD2 350 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PHYHO14832 338 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 GPX5O75715 221 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 CELA3AP09093 270 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PGA3P0DJD8 388 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 CD53P19397 219 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SPINK2P20155 84 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 ENPP1P22413 925 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PTGS2P35354 604 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 STARP49675 285 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 OR12D2P58182 307 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 CLRN1P58418 232 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 RPS3AP61247 264 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 RPS25P62851 125 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 GLO1Q04760 184 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 THEM4Q5T1C6 240 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 UBQLNLQ8IYU4 475 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 ZFP41Q8N8Y5 198 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SYT14Q8NB59 555 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 OR9K2Q8NGE7 335 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 OR10D3Q8NH80 312 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 RBP7Q96R05 134 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 EMC6Q9BV81 110 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 TIGARQ9NQ88 270 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 COA3Q9Y2R0 106 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 SF3B6Q9Y3B4 125 aaKnown RBP11.32□□□□□ -0.6
CACNB3-223ENST00000552480 TMEM14AQ9Y6G1 99 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 AHCTF1Q8WYP5 2266 aa11.32□□□□□ -0.6
CACNB3-223ENST00000552480 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 PNMA8CA0A1B0GUJ8 204 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 ZNF726A6NNF4 738 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 H0YC42 278 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 CXCL13O43927 109 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 GPANK1O95872 356 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 HLA-DQA2P01906 255 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 NR2C1P13056 603 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 CELP19835 753 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 PAX7P23759 505 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 TGFBR1P36897 503 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 ENTPD1P49961 510 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 LHX2P50458 406 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 GBX2P52951 348 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-223ENST00000552480 SUCLG1P53597 346 aaKnown RBP11.31□□□□□ -0.6
CACNB3-223ENST00000552480 CLDN17P56750 224 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 TUBA1BP68363 451 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 FMODQ06828 376 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 CAMK2DQ13557 499 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 ETFDHQ16134 617 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 ZNF684Q5T5D7 378 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
CACNB3-223ENST00000552480 PLEKHG7Q6ZR37 379 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms