RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ROPN1Q9HAT0 212 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 TAAR3PQ9P1P4 343 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 POFUT2Q9Y2G5 429 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 PPIAL4AQ9Y536 164 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 PCDHGB1Q9Y5G3 927 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 TRAV36DV7A0A075B6V5 113 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 A0A0G2JPF8 293 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 IGHV3-64DA0A0J9YX35 117 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CPSF4LA6NMK7 179 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ZNF99A8MXY4 864 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HNRNPCL2B2RXH8 293 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HNRNPCL3B7ZW38 293 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 RPL36A-HNRNPH2H7BZ11 118 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 M0R233 179 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CLIC1O00299 241 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 AIM2O14862 343 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 BIRC5O15392 142 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 TBX1O43435 398 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 PLPP2O43688 288 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SYNGR3O43761 229 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HNRNPCL1O60812 293 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 RP2O75695 350 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CH25HO95992 272 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 MSMBP08118 114 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HNRNPCL4P0DMR1 293 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 UQCRBP14927 111 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HOXB9P17482 250 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 FUT1P19526 365 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 TNFRSF1BP20333 461 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 FUT4P22083 530 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 FKBP2P26885 142 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CDAP32320 146 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 THBS2P35442 1172 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ARR3P36575 388 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 MPV17P39210 176 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 DVL1P1P54792 670 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CDH12P55289 794 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 LCN2P80188 198 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SF3A3Q12874 501 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 IKZF1Q13422 519 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 OR1Q1Q15612 314 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 NPTX1Q15818 432 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 TRMT5Q32P41 509 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ALG10BQ5I7T1 473 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 RNF220Q5VTB9 566 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 OGFOD2Q6N063 350 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SHQ1Q6PI26 577 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 H1FNTQ75WM6 255 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SSX8Q7RTT4 187 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 GLCCI1Q86VQ1 547 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 FUNDC1Q8IVP5 155 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ZNF440Q8IYI8 595 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 BCL6BQ8N143 479 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 LRRC18Q8N456 261 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 TRIML2Q8N7C3 387 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 CLDN22Q8N7P3 220 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SYT14Q8NB59 555 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ZNF540Q8NDQ6 660 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 VANGL1Q8TAA9 524 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 MAGEE2Q8TD90 523 aaPredicted RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 GTF2H4Q92759 462 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ITCHQ96J02 903 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ANKRD27Q96NW4 1050 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 EBF4Q9BQW3 602 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 PARD6BQ9BYG5 372 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 ULBP2Q9BZM5 246 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 RACGAP1Q9H0H5 632 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 UBAP1Q9NZ09 502 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 HAO1Q9UJM8 370 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 USP22Q9UPT9 525 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 SF3B6Q9Y3B4 125 aaKnown RBP5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 NOX1Q9Y5S8 564 aa5.83□□□□□ -1.48
PRPF40B-214ENST00000551320 IGKV1D-43A0A0B4J1Z2 117 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 TMEM120BA0PK00 339 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 ZNF726A6NNF4 738 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 B4DSR2 109 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 C5orf58C9J3I9 102 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 PLPP3O14495 311 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 UBDO15205 165 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 HDAC3O15379 428 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 TPD52L2O43399 206 aaKnown RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 SPRY3O43610 288 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 SNNO75324 88 aaPredicted RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 PDE5AO76074 875 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 VAMP5O95183 116 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 ZNF205O95201 554 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 LYPD3O95274 346 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 MPZL1O95297 269 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 LCKP06239 509 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 ADORA3P0DMS8 318 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 OR8G3PP0DMU2 310 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 CCNOP22674 350 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 ZFP36P26651 326 aaKnown RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 CSNK1A1P48729 337 aa5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 PCBP3P57721 371 aaKnown RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 RGS8P57771 180 aaPredicted RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 SEC61A1P61619 476 aaKnown RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 HOXA4Q00056 320 aaPredicted RBP5.82□□□□□ -1.48
PRPF40B-214ENST00000551320 DPY19L1Q2PZI1 675 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms