RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 hCG_2039718K7EN88 272 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 CXCR6O00574 342 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 OR6A2O95222 327 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 QDPRP09417 244 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 UMPSP11172 480 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 ZNF26P17031 533 aaPredicted RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 DRD4P21917 467 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 NR4A1P22736 598 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 YAP1P46937 504 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 PTDSS1P48651 473 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 PPOXP50336 477 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 DSCR9P59020 149 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 SNRPD2P62316 118 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 RAB1AP62820 205 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 RAB39AQ14964 217 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 LAPTM4AQ15012 233 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 FXNQ16595 210 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 PIWIL3Q7Z3Z3 882 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 SPATA21Q7Z572 469 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 ARPINQ7Z6K5 226 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 OFCC1Q8IZS5 231 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 SLC22A24Q8N4F4 322 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 FAM168AQ92567 244 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 HDAC2Q92769 488 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 MCHR2Q969V1 340 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 ZNF566Q969W8 418 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 TNFRSF13CQ96RJ3 184 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 SH3GL3Q99963 347 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 MYEF2Q9P2K5 600 aaKnown RBP11.23□□□□□ -0.61
NPAS3-209ENST00000551008 RHCGQ9UBD6 479 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 PMF1-BGLAPU3KQ54 211 aa11.23□□□□□ -0.61
NPAS3-209ENST00000551008 MXRA5Q9NR99 2828 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 NPIPB13A6NJU9 1138 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 NPIPB4C9JG80 1138 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 CCDC22O60826 627 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 SLC2A10O95528 541 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 BCL10O95999 233 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 IFNA14P01570 189 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 MMP7P09237 267 aaPredicted RBP11.22□□□□□ -0.61
NPAS3-209ENST00000551008 IGHV4-31P0DP07 118 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 SLC25A16P16260 332 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 NCK1P16333 377 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 NPR2P20594 1047 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 VLDLRP98155 873 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 FMODQ06828 376 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 DAG1Q14118 895 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 C10orf128Q5T292 105 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 C6orf52Q5T4I8 152 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 LRP11Q86VZ4 500 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 FAM86B1Q8N7N1 296 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 CLDN22Q8N7P3 220 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 SYT14Q8NB59 555 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 OR4K5Q8NGD3 323 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 MRPL37Q9BZE1 423 aaKnown RBP11.22□□□□□ -0.61
NPAS3-209ENST00000551008 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 MED31Q9Y3C7 131 aa11.22□□□□□ -0.61
NPAS3-209ENST00000551008 A0A087WUU8 490 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.61
NPAS3-209ENST00000551008 SNX3O60493 162 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 UBL3O95164 117 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IGHG1P01857 330 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IGHMP01871 453 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 HIST1H2ABP04908 130 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IFI30P13284 250 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 ACADSP16219 412 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 NR4A2P43354 598 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 NUDT2P50583 147 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 PPP2R2BQ00005 443 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 ST3GAL3Q11203 375 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 TBPL2Q6SJ96 375 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 HIST3H2AQ7L7L0 130 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 NRMQ8IXM6 262 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 IL17RDQ8NFM7 739 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 ZNF519Q8TB69 540 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 HIST1H2ACQ93077 130 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 MRPL24Q96A35 216 aaKnown RBP11.21□□□□□ -0.61
NPAS3-209ENST00000551008 HSH2DQ96JZ2 352 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 FOXN4Q96NZ1 517 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 MDFIQ99750 246 aa11.21□□□□□ -0.61
NPAS3-209ENST00000551008 VRK1Q99986 396 aaPredicted RBP11.21□□□□□ -0.61
NPAS3-209ENST00000551008 HOPXQ9BPY8 73 aaPredicted RBP11.21□□□□□ -0.61
NPAS3-209ENST00000551008 DENND2DQ9H6A0 471 aaPredicted RBP11.21□□□□□ -0.61
NPAS3-209ENST00000551008 TRAV27A0A087WT01 109 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 CENPBD1B2RD01 187 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 CDC42EP2O14613 210 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 MGRN1O60291 552 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 ZNF682O95780 498 aa11.2□□□□□ -0.62
NPAS3-209ENST00000551008 SERPINA1P01009 418 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms