RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SERPINA5P05154 406 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 LYNX1P0DP58 116 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ITGA2P17301 1181 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 EGR1P18146 543 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 AHCYP23526 432 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 SLC6A2P23975 617 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 AQP1P29972 269 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 LSP1P33241 339 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 GPR6P46095 362 aaPredicted RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 GIPRP48546 466 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 PTDSS1P48651 473 aaKnown RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 CSNK1A1P48729 337 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 CDH12P55289 794 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 TMEM33P57088 247 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 MAGOHP61326 146 aaKnown RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 RAB1AP62820 205 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 PIGFQ07326 219 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 SCGB2A2Q13296 93 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 CAMK2DQ13557 499 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 CCNIQ14094 377 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 SCARB2Q14108 478 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 OR1Q1Q15612 314 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 MSMPQ1L6U9 139 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 NRN1LQ496H8 165 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 GKAP1Q5VSY0 366 aaPredicted RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZNF613Q6PF04 617 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 DEF8Q6ZN54 512 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 RINLQ6ZS11 566 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 PIWIL3Q7Z3Z3 882 aaKnown RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 DPPA2Q7Z7J5 298 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 GLCCI1Q86VQ1 547 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ARMC8Q8IUR7 673 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 FUNDC1Q8IVP5 155 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 C10orf53Q8N6V4 93 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 HIPK4Q8NE63 616 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 OR5J2Q8NH18 312 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZFAND2BQ8WV99 257 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 TMEM186Q96B77 213 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZBTB9Q96C00 473 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 TLCD1Q96CP7 247 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 TXNDC15Q96J42 360 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZNF416Q9BWM5 594 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 RACGAP1Q9H0H5 632 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZNF385DQ9H6B1 395 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 SLC52A3Q9NQ40 469 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 CCDC167Q9P0B6 97 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ZNF346Q9UL40 294 aaKnown RBP6.54□□□□□ -1.36
NEK3-201ENST00000550331 ANGPT4Q9Y264 503 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 ARFGEF3Q5TH69 2177 aa6.54□□□□□ -1.36
NEK3-201ENST00000550331 A0A1W2PPW3 197 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SLC22A23A1A5C7 686 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 LRRN3E7EW58 273 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 CHP2O43745 196 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 TPST2O60704 377 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 RP2O75695 350 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 OR6A2O95222 327 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 HPXP02790 462 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 MSMBP08118 114 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ADORA3P0DMS8 318 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 OR8G3PP0DMU2 310 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SAGP10523 405 aaPredicted RBP6.53□□□□□ -1.36
NEK3-201ENST00000550331 IDH3AP50213 366 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ATP4BP51164 291 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 AQP5P55064 265 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 PCBP3P57721 371 aaKnown RBP6.53□□□□□ -1.36
NEK3-201ENST00000550331 ZP4Q12836 540 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 RAB39AQ14964 217 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 MMEL1Q495T6 779 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 PAGE3Q5JUK9 113 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ZNF584Q8IVC4 421 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 WDFY1Q8IWB7 410 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SKA3Q8IX90 412 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SLC22A24Q8N4F4 322 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 TEX29Q8N6K0 151 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 C11orf65Q8NCR3 313 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 OR51F2Q8NH61 342 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 OR6X1Q8NH79 312 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 CLDND2Q8NHS1 167 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 TMEM54Q969K7 222 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ZNF566Q969W8 418 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ZMYND19Q96E35 227 aaPredicted RBP6.53□□□□□ -1.36
NEK3-201ENST00000550331 SLC25A44Q96H78 314 aaPredicted RBP6.53□□□□□ -1.36
NEK3-201ENST00000550331 MCHR1Q99705 422 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 ARHGDIGQ99819 225 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SYT3Q9BQG1 590 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 WFDC6Q9BQY6 131 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 CPPED1Q9BRF8 314 aaPredicted RBP6.53□□□□□ -1.36
NEK3-201ENST00000550331 SLC19A3Q9BZV2 496 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 C1orf198Q9H425 327 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 IKZF5Q9H5V7 419 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 TMBIM4Q9HC24 238 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 SLCO1B3Q9NPD5 702 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 GLTPQ9NZD2 209 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 GRIP1Q9Y3R0 1128 aa6.53□□□□□ -1.36
NEK3-201ENST00000550331 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms