RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 QDPRP09417 244 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 FUT1P19526 365 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 PCMT1P22061 227 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF84P51523 738 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 CLRN1P58418 232 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 PLP2Q04941 152 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 TAF11Q15544 211 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 MOGQ16653 247 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 WDR88Q6ZMY6 472 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 CARM1Q86X55 608 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 RBM45Q8IUH3 476 aaKnown RBP9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 OR4D11Q8NGI4 311 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 FNDC8Q8TC99 324 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 SGTBQ96EQ0 304 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF75AQ96N20 296 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 BPESC1Q9GZL8 116 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEM38BQ9NVV0 291 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 RIMS3Q9UJD0 308 aa9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 CHD3Q12873 2000 aaKnown RBP9.39□□□□□ -0.91
VTI1BP3-201ENST00000550220 RTTNQ86VV8 2226 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 IQCMA0A1B0GVH7 501 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 NPIPB13A6NJU9 1138 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 RNF212BA8MTL3 300 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 NPIPB4C9JG80 1138 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 KPNA4O00629 521 aaPredicted RBP9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 NDUFAB1O14561 156 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 MRASO14807 208 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 OR7A10O76100 309 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 TGFAP01135 160 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 THY1P04216 161 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 TACSTD2P09758 323 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 PGA4P0DJD7 388 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 PGA3P0DJD8 388 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 RAD52P43351 418 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 SELENOWP63302 87 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 ST3GAL3Q11203 375 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 KLF10Q13118 480 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 RABL3Q5HYI8 236 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 UNQ6126/PRO20091Q6UXV3 157 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 SLC16A14Q7RTX9 510 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 ARPINQ7Z6K5 226 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 MYPOPQ86VE0 399 aaPredicted RBP9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 LRRC17Q8N6Y2 441 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 C10orf82Q8WW14 230 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEM239Q8WW34 195 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 MSI2Q96DH6 328 aaKnown RBP9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF583Q96ND8 569 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 PRSS27Q9BQR3 290 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 BCL2L14Q9BZR8 327 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 RNF121Q9H920 327 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 SMURF2Q9HAU4 748 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 SAR1AQ9NR31 198 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 INIPQ9NRY2 104 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
VTI1BP3-201ENST00000550220 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 LOC100653049A0A140TA62 436 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 FAM220BPB1ANY3 271 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 FXYD1O00168 92 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 KRT34O76011 436 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SNAP29O95721 258 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 ACADSP16219 412 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SRD5A1P18405 259 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 KDELR2P33947 212 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 GUCA1AP43080 201 aaPredicted RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 TMEM33P57088 247 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 RPL18Q07020 188 aaKnown RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 PIN1Q13526 163 aaPredicted RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 RAB39AQ14964 217 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 FXNQ16595 210 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 TBC1D28Q2M2D7 210 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 ANKDD1AQ495B1 522 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 DEF8Q6ZN54 512 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 C1orf174Q8IYL3 243 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 CDK20Q8IZL9 346 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SLC30A7Q8NEW0 376 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 OR2T12Q8NG77 320 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 RP9Q8TA86 221 aaKnown RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 C11orf40Q8WZ69 217 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 RDH5Q92781 318 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SEPHS2Q99611 448 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 MRPL13Q9BYD1 178 aaKnown RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 MRPL37Q9BZE1 423 aaKnown RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 CHODLQ9H9P2 273 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SIAEQ9HAT2 523 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 MEPEQ9NQ76 525 aaPredicted RBP9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 FGFR1OP2Q9NVK5 253 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 SLCO1C1Q9NYB5 712 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 ZNF224Q9NZL3 707 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 CAPN7Q9Y6W3 813 aa9.37□□□□□ -0.91
VTI1BP3-201ENST00000550220 A0A1W2PPW3 197 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 ELOVL7A1L3X0 281 aa9.36□□□□□ -0.91
VTI1BP3-201ENST00000550220 MT-ND5P03915 603 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms